RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 IZUMO1Q8IYV9 350 aa6□□□□□ -1.45
CUX1-219ENST00000606749 STX19Q8N4C7 294 aa6□□□□□ -1.45
CUX1-219ENST00000606749 COMMD1Q8N668 190 aa6□□□□□ -1.45
CUX1-219ENST00000606749 ZFP41Q8N8Y5 198 aa6□□□□□ -1.45
CUX1-219ENST00000606749 TMEM104Q8NE00 496 aa6□□□□□ -1.45
CUX1-219ENST00000606749 OR2T10Q8NGZ9 312 aa6□□□□□ -1.45
CUX1-219ENST00000606749 NEK7Q8TDX7 302 aa6□□□□□ -1.45
CUX1-219ENST00000606749 CYGBQ8WWM9 190 aa6□□□□□ -1.45
CUX1-219ENST00000606749 RTN4IP1Q8WWV3 396 aaPredicted RBP6□□□□□ -1.45
CUX1-219ENST00000606749 MUL1Q969V5 352 aa6□□□□□ -1.45
CUX1-219ENST00000606749 MRPS24Q96EL2 167 aaKnown RBP6□□□□□ -1.45
CUX1-219ENST00000606749 PGLYRP3Q96LB9 341 aa6□□□□□ -1.45
CUX1-219ENST00000606749 P2RX4Q99571 388 aa6□□□□□ -1.45
CUX1-219ENST00000606749 ABCG5Q9H222 651 aa6□□□□□ -1.45
CUX1-219ENST00000606749 SPACA1Q9HBV2 294 aa6□□□□□ -1.45
CUX1-219ENST00000606749 CHCHD3Q9NX63 227 aaKnown RBP6□□□□□ -1.45
CUX1-219ENST00000606749 RCC2Q9P258 522 aaKnown RBP6□□□□□ -1.45
CUX1-219ENST00000606749 CKLFQ9UBR5 152 aa6□□□□□ -1.45
CUX1-219ENST00000606749 TRAPPC2LQ9UL33 140 aa6□□□□□ -1.45
CUX1-219ENST00000606749 DNAH3Q8TD57 4116 aa6□□□□□ -1.45
CUX1-219ENST00000606749 NUDT19A8MXV4 375 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 C12orf77C9JDV5 145 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 AP4M1O00189 453 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 EBAG9O00559 213 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 SLC31A2O15432 143 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 SPINT2O43291 252 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 MOSP00540 346 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 MAS1P04201 325 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 FSTP19883 344 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 FUT3P21217 361 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 IL3RAP26951 378 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 VHLP40337 213 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 GPR12P47775 334 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 F2RL1P55085 397 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 ADARB1P78563 741 aaKnown RBP5.99□□□□□ -1.45
CUX1-219ENST00000606749 MED21Q13503 144 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 PNLIPRP3Q17RR3 467 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 CT45A1Q5HYN5 189 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 VAX1Q5SQQ9 334 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 STEAP3Q658P3 488 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 RAB12Q6IQ22 244 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 SLC25A48Q6ZT89 311 aaKnown RBP5.99□□□□□ -1.45
CUX1-219ENST00000606749 LYPD6Q86Y78 171 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 ZNF695Q8IW36 515 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 GAPTQ8N292 157 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 DHRSXQ8N5I4 330 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 JAGN1Q8N5M9 183 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 ZNF439Q8NDP4 499 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 KLHL30-AS1Q8NEE0 82 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 OR4K15Q8NH41 348 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 OR1L1Q8NH94 360 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 CT45A3Q8NHU0 189 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 RBMXL1Q96E39 390 aaKnown RBP5.99□□□□□ -1.45
CUX1-219ENST00000606749 DUX3Q96PT4 197 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 OR14A2Q96R54 314 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 S1PR3Q99500 378 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 MCRIP2Q9BUT9 160 aaKnown RBP5.99□□□□□ -1.45
CUX1-219ENST00000606749 GPR61Q9BZJ8 451 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 BANF2Q9H503 90 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 DCLRE1BQ9H816 532 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 LIN7CQ9NUP9 197 aaKnown RBP5.99□□□□□ -1.45
CUX1-219ENST00000606749 ETAA1Q9NY74 926 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 MRPS28Q9Y2Q9 187 aaKnown RBP5.99□□□□□ -1.45
CUX1-219ENST00000606749 PEX16Q9Y5Y5 336 aa5.99□□□□□ -1.45
CUX1-219ENST00000606749 PNMA8CA0A1B0GUJ8 204 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 FAM90A10PA6NDY2 464 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 FAM90A7PA6NKC0 464 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 FAM90A23PA8MXZ1 464 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 H0YHG0 523 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 CCL24O00175 119 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 SC5DO75845 299 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 HBZP02008 142 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 RPLP1P05386 114 aaKnown RBP5.98□□□□□ -1.45
CUX1-219ENST00000606749 CD1AP06126 327 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 GLAP06280 429 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 RCC1P18754 421 aaPredicted RBP5.98□□□□□ -1.45
CUX1-219ENST00000606749 CELP19835 753 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 CAPGP40121 348 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 CDX1P47902 265 aaPredicted RBP5.98□□□□□ -1.45
CUX1-219ENST00000606749 ZNF137PP52743 207 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 FOXE3Q13461 319 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 GPR50Q13585 617 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 DOC2BQ14184 412 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 KIR2DS1Q14954 304 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 TMEM30BQ3MIR4 351 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 MORN2Q502X0 79 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 C6orf183Q5T699 404 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 AWAT2Q6E213 333 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 SIGIRRQ6IA17 410 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 LAIR2Q6ISS4 152 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 UNQ9370/PRO34162Q6UXP9 181 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 LCNL1Q6ZST4 164 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 PRR18Q8N4B5 295 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 FAM71E2Q8N5Q1 922 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 PACRGLQ8N7B6 248 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 RNF152Q8N8N0 203 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 SETD9Q8NE22 299 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 OR8H1Q8NGG4 311 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 OR10V1Q8NGI7 309 aa5.98□□□□□ -1.45
CUX1-219ENST00000606749 DPF1Q92782 380 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms