RNA–Protein interactions for RNA: ENST00000606557.1

SNX5-217, Transcript of sorting nexin 5, humanhuman

BASIC

Gene SNX5, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-217ENST00000606557 ZNF880Q6PDB4 577 aa18.69■□□□□ 0.58
SNX5-217ENST00000606557 ZNF554Q86TJ5 538 aa18.69■□□□□ 0.58
SNX5-217ENST00000606557 OR52M1Q8NGK5 317 aa18.69■□□□□ 0.58
SNX5-217ENST00000606557 ZFAND2BQ8WV99 257 aa18.69■□□□□ 0.58
SNX5-217ENST00000606557 SSMEM1Q8WWF3 244 aa18.69■□□□□ 0.58
SNX5-217ENST00000606557 SLC25A38Q96DW6 304 aa18.69■□□□□ 0.58
SNX5-217ENST00000606557 RIMS4Q9H426 269 aaPredicted RBP18.69■□□□□ 0.58
SNX5-217ENST00000606557 TAF9BQ9HBM6 251 aa18.69■□□□□ 0.58
SNX5-217ENST00000606557 CHMP1AQ9HD42 196 aaPredicted RBP18.69■□□□□ 0.58
SNX5-217ENST00000606557 RHBDL2Q9NX52 303 aa18.69■□□□□ 0.58
SNX5-217ENST00000606557 TRBV6-6A0A0A6YYG2 114 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 TRIM77I1YAP6 450 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 MFNGO00587 321 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 SPINT2O43291 252 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 HBZP02008 142 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 HIST1H1DP16402 221 aaKnown RBP18.68■□□□□ 0.58
SNX5-217ENST00000606557 PAX6P26367 422 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 IER3P46695 156 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 LOXL3P58215 753 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 MINOS1Q5TGZ0 78 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 MOB1BQ7L9L4 216 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 TMEM86BQ8N661 226 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 OR9G1Q8NH87 305 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 OR1L1Q8NH94 360 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 ZNF596Q8TC21 504 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 LEAP2Q969E1 77 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 MEGF9Q9H1U4 602 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 RAB9BQ9NP90 201 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 C12orf4Q9NQ89 552 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 KCNIP1Q9NZI2 227 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 ABRACLQ9P1F3 81 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 MINOS1-NBL1R4GNA1 71 aa18.68■□□□□ 0.58
SNX5-217ENST00000606557 SDCBPO00560 298 aaPredicted RBP18.67■□□□□ 0.58
SNX5-217ENST00000606557 IGHV4-59P01825 116 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 RNASE1P07998 156 aaKnown RBP18.67■□□□□ 0.58
SNX5-217ENST00000606557 GNB3P16520 340 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 HMGN3Q15651 99 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 HLA-DRB5Q30154 266 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 TMEM30BQ3MIR4 351 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 DYNAPQ8N1N2 210 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 PRR18Q8N4B5 295 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 MALSU1Q96EH3 234 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 CMSS1Q9BQ75 279 aaKnown RBP18.67■□□□□ 0.58
SNX5-217ENST00000606557 GFOD1Q9NXC2 390 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 SCOCQ9UIL1 159 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 SPATA2Q9UM82 520 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 PSG11Q9UQ72 335 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 POMT1Q9Y6A1 747 aa18.67■□□□□ 0.58
SNX5-217ENST00000606557 A0A075B6Q4 140 aa18.66■□□□□ 0.58
SNX5-217ENST00000606557 TOR1AO14656 332 aa18.66■□□□□ 0.58
SNX5-217ENST00000606557 SCGNO76038 276 aa18.66■□□□□ 0.58
SNX5-217ENST00000606557 IGHV3-7P01780 117 aa18.66■□□□□ 0.58
SNX5-217ENST00000606557 HTR1DP28221 377 aa18.66■□□□□ 0.58
SNX5-217ENST00000606557 C5orf24Q7Z6I8 188 aa18.66■□□□□ 0.58
SNX5-217ENST00000606557 CLVS1Q8IUQ0 354 aaPredicted RBP18.66■□□□□ 0.58
SNX5-217ENST00000606557 NDNFQ8TB73 568 aa18.66■□□□□ 0.58
SNX5-217ENST00000606557 TMEM158Q8WZ71 300 aa18.66■□□□□ 0.58
SNX5-217ENST00000606557 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNX5-217ENST00000606557 COL6A5A8TX70 2615 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 IGHV3-43A0A0B4J1X8 118 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 POM121CA8CG34 1229 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 SERPINE3A8MV23 424 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 J3QR06 171 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 IGHV3-43DP0DP04 118 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 PRRX1P54821 245 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 FAM53AQ6NSI3 398 aaPredicted RBP18.65■□□□□ 0.58
SNX5-217ENST00000606557 SETD6Q8TBK2 473 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 FAM216AQ8WUB2 273 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 MMP28Q9H239 520 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 DCSTAMPQ9H295 470 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 DPAGT1Q9H3H5 408 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 TNFRSF19Q9NS68 423 aa18.65■□□□□ 0.58
SNX5-217ENST00000606557 CD3GP09693 182 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 GNG10P50151 68 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 ARL6IP1Q15041 203 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 SSX2Q16385 188 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 AANATQ16613 207 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 LRRC75BQ2VPJ9 315 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.64■□□□□ 0.57
SNX5-217ENST00000606557 KCTD12Q96CX2 325 aaKnown RBP18.64■□□□□ 0.57
SNX5-217ENST00000606557 MDFIQ99750 246 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 CHIAQ9BZP6 476 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 Q9N2K0 584 aa18.64■□□□□ 0.57
SNX5-217ENST00000606557 RNF212BA8MTL3 300 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 BUB1B-PAK6H3BSN5 160 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 Q3ZCU0 254 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 RAB2BQ8WUD1 216 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 CREB3L1Q96BA8 519 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 SSX3Q99909 188 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 DPM3Q9P2X0 92 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 GNG12Q9UBI6 72 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 MGAT4AQ9UM21 535 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 HILPDAQ9Y5L2 63 aa18.63■□□□□ 0.57
SNX5-217ENST00000606557 A0A1W2PPE3 182 aa18.62■□□□□ 0.57
SNX5-217ENST00000606557 VGLL3A8MV65 326 aa18.62■□□□□ 0.57
SNX5-217ENST00000606557 LEUTXA8MZ59 168 aa18.62■□□□□ 0.57
SNX5-217ENST00000606557 LY6LH3BQJ8 138 aa18.62■□□□□ 0.57
SNX5-217ENST00000606557 TMBIM6P55061 237 aa18.62■□□□□ 0.57
SNX5-217ENST00000606557 HLA-DRB3P79483 266 aa18.62■□□□□ 0.57
SNX5-217ENST00000606557 MRPS15P82914 257 aaKnown RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms