RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 C12orf77C9JDV5 145 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 FGF16O43320 207 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 IGKV1D-33P01593 117 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 IGKV1-33P01594 117 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 GAPDHP04406 335 aaKnown RBP17.96■□□□□ 0.47
SSBP4-209ENST00000601357 HES1Q14469 280 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 C9orf152Q5JTZ5 239 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 C6orf141Q5SZD1 244 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 SYT6Q5T7P8 510 aaPredicted RBP17.96■□□□□ 0.47
SSBP4-209ENST00000601357 ZNF439Q8NDP4 499 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 WFDC9Q8NEX5 89 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 OR4X2Q8NGF9 303 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 SELENOIQ9C0D9 397 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 ETAA1Q9NY74 926 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 DNAH3Q8TD57 4116 aa17.96■□□□□ 0.47
SSBP4-209ENST00000601357 IGHV3-43A0A0B4J1X8 118 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 TCRBV4S1A1TA0A5B7 111 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 CCRL2O00421 344 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 CA11O75493 328 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 CRTAPO75718 401 aaPredicted RBP17.95■□□□□ 0.46
SSBP4-209ENST00000601357 GLAP06280 429 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 IGHV3-43DP0DP04 118 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 TMEM30BQ3MIR4 351 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 IZUMO1Q8IYV9 350 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 MS4A15Q8N5U1 240 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 OR4K15Q8NH41 348 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 CYYR1Q96J86 154 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 GHRLQ9UBU3 117 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 TRAPPC2LQ9UL33 140 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 PEX16Q9Y5Y5 336 aa17.95■□□□□ 0.46
SSBP4-209ENST00000601357 FUT3P21217 361 aa17.94■□□□□ 0.46
SSBP4-209ENST00000601357 VHLP40337 213 aa17.94■□□□□ 0.46
SSBP4-209ENST00000601357 REG1BP48304 166 aa17.94■□□□□ 0.46
SSBP4-209ENST00000601357 ZNF137PP52743 207 aa17.94■□□□□ 0.46
SSBP4-209ENST00000601357 HNF4GQ14541 408 aa17.94■□□□□ 0.46
SSBP4-209ENST00000601357 ACSM3Q53FZ2 586 aa17.94■□□□□ 0.46
SSBP4-209ENST00000601357 FAM27D1Q5T7N8 215 aa17.94■□□□□ 0.46
SSBP4-209ENST00000601357 SLC25A48Q6ZT89 311 aaKnown RBP17.94■□□□□ 0.46
SSBP4-209ENST00000601357 Q8N6K4 173 aa17.94■□□□□ 0.46
SSBP4-209ENST00000601357 RTN4IP1Q8WWV3 396 aaPredicted RBP17.94■□□□□ 0.46
SSBP4-209ENST00000601357 PTGES3LE9PB15 166 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 SLC31A2O15432 143 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 SPINT2O43291 252 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 RCC1P18754 421 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-209ENST00000601357 GABPB1Q06547 395 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-209ENST00000601357 GPR50Q13585 617 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 IRF3Q14653 427 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 SPHARQ15513 63 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 C6orf183Q5T699 404 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 TRAT1Q6PIZ9 186 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 MOB3BQ86TA1 216 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 LRRTM1Q86UE6 522 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 NRG4Q8WWG1 115 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 PHYHIPQ92561 330 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 SGCDQ92629 289 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 EAF1Q96JC9 268 aaPredicted RBP17.93■□□□□ 0.46
SSBP4-209ENST00000601357 RAB9BQ9NP90 201 aa17.93■□□□□ 0.46
SSBP4-209ENST00000601357 MBNL3Q9NUK0 354 aaKnown RBP17.93■□□□□ 0.46
SSBP4-209ENST00000601357 PSMB11A5LHX3 300 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 H0YHG0 523 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 PDCD6O75340 191 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 IGHG2P01859 326 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 HBZP02008 142 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 PRB2P02812 416 aaPredicted RBP17.92■□□□□ 0.46
SSBP4-209ENST00000601357 CD37P11049 281 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 ZNF134P52741 427 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 AQP4P55087 323 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 SLC35A2P78381 396 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 REC114Q7Z4M0 266 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 CST11Q9H112 138 aa17.92■□□□□ 0.46
SSBP4-209ENST00000601357 NOTCH3Q9UM47 2321 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 IGHV3-72A0A0B4J1Y9 119 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 UBBP0CG47 229 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 PF4V1P10720 104 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 CT45A1Q5HYN5 189 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 C1orf100Q5SVJ3 147 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 OR1L1Q8NH94 360 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 CT45A3Q8NHU0 189 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 FAM46BQ96A09 425 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 PHF21AQ96BD5 680 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 TMED9Q9BVK6 235 aa17.91■□□□□ 0.46
SSBP4-209ENST00000601357 UBE2QL1A1L167 161 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 IL3RAP26951 378 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 CD1BP29016 333 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 Q6ZPA2 131 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 ZNF554Q86TJ5 538 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 ZNF329Q86UD4 541 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 TGIF2LXQ8IUE1 241 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 PRR18Q8N4B5 295 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 OR2T10Q8NGZ9 312 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 MRPL30Q8TCC3 161 aaKnown RBP17.9■□□□□ 0.46
SSBP4-209ENST00000601357 CHPT1Q8WUD6 406 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 NOL4LQ96MY1 436 aaPredicted RBP17.9■□□□□ 0.46
SSBP4-209ENST00000601357 TAF9BQ9HBM6 251 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 SCN3BQ9NY72 215 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 GNG12Q9UBI6 72 aa17.9■□□□□ 0.46
SSBP4-209ENST00000601357 TXNL1O43396 289 aa17.89■□□□□ 0.45
SSBP4-209ENST00000601357 UCHL1P09936 223 aa17.89■□□□□ 0.45
SSBP4-209ENST00000601357 VSIG8P0DPA2 414 aa17.89■□□□□ 0.45
SSBP4-209ENST00000601357 CD33P20138 364 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms