RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 ZNF137PP52743 207 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 F2RL1P55085 397 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 FOXE3Q13461 319 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 MPV17LQ2QL34 196 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 DEFB136Q30KP8 78 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 UNQ9370/PRO34162Q6UXP9 181 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 SLC25A48Q6ZT89 311 aaKnown RBP14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 GAPTQ8N292 157 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 FAM71E2Q8N5Q1 922 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 OR13C5Q8NGS8 318 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 TFAP2CQ92754 450 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 HSPB9Q9BQS6 159 aa14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 RCC2Q9P258 522 aaKnown RBP14.09□□□□□ -0.15
CHMP2A-208ENST00000601220 C12orf77C9JDV5 145 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 ZNF780AO75290 641 aaPredicted RBP14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 MOSP00540 346 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 ELANEP08246 267 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 DCKP27707 260 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 RPS11P62280 158 aaKnown RBP eCLIP14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 GPR50Q13585 617 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 CT45A1Q5HYN5 189 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 ATAD3CQ5T2N8 411 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 CT45A3Q8NHU0 189 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 PAK1IP1Q9NWT1 392 aaPredicted RBP14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 BABAM2Q9NXR7 383 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 SCOCQ9UIL1 159 aa14.08□□□□□ -0.16
CHMP2A-208ENST00000601220 RAMP3O60896 148 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 IGHG4P01861 327 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 GTF2F2P13984 249 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 LUMP51884 338 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 GP2P55259 537 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 PPP3R1P63098 170 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 DCTN2Q13561 401 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 SLC22A6Q4U2R8 563 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 NKAPLQ5M9Q1 402 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 ZNF485Q8NCK3 441 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 OR8H1Q8NGG4 311 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 OR8U1Q8NH10 309 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 SMIM19Q96E16 107 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 CYYR1Q96J86 154 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 ZNF184Q99676 751 aaPredicted RBP14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 GON7Q9BXV9 100 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 ZMAT5Q9UDW3 170 aaKnown RBP14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 CLEC2DQ9UHP7 191 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 ZNF580Q9UK33 172 aa14.07□□□□□ -0.16
CHMP2A-208ENST00000601220 TRAV8-7A0A075B6U6 113 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 AIPO00170 330 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 IGF1P05019 195 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 RIPK1Q13546 671 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 FHL3Q13643 280 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 KIAA0141Q14154 515 aaPredicted RBP14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 CXorf66Q5JRM2 361 aaPredicted RBP14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 SYT6Q5T7P8 510 aaPredicted RBP14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 DMKNQ6E0U4 476 aaPredicted RBP14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 LYPD6Q86Y78 171 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 MYOZ3Q8TDC0 251 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 GHSRQ92847 366 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 RASL11BQ9BPW5 248 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 S100A14Q9HCY8 104 aa14.06□□□□□ -0.16
CHMP2A-208ENST00000601220 NHLRC4P0CG21 123 aaPredicted RBP14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 IL3RAP26951 378 aa14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 PSMB8P28062 276 aa14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 TMPRSS11AQ6ZMR5 421 aa14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 PQLC1Q8N2U9 271 aa14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 OR1L1Q8NH94 360 aa14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 PGLYRP3Q96LB9 341 aa14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 S100A13Q99584 98 aa14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 DIMT1Q9UNQ2 313 aaKnown RBP14.05□□□□□ -0.16
CHMP2A-208ENST00000601220 TRBV5-7A0A0A0MS05 114 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 TXNL1O43396 289 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 SC5DO75845 299 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 HBZP02008 142 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 RCC1P18754 421 aaPredicted RBP14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 SOX6P35712 828 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 RAB25P57735 213 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 GPR176Q14439 515 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 Q499Y3 187 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 STEAP3Q658P3 488 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 GLIPR1L1Q6UWM5 242 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 OR10V1Q8NGI7 309 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 OR5M8Q8NGP6 311 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 OR4K15Q8NH41 348 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 NEK7Q8TDX7 302 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 C4orf3Q8WVX3 66 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 MUL1Q969V5 352 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 MRPS24Q96EL2 167 aaKnown RBP14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 RITA1Q96K30 269 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 KCTD7Q96MP8 289 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 PRR25Q96S07 402 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 SPACA1Q9HBV2 294 aa14.04□□□□□ -0.16
CHMP2A-208ENST00000601220 MCRIP1C9JLW8 97 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 SPINT2O43291 252 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 LANCL1O43813 399 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 RRP9O43818 475 aaKnown RBP14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 FSTP19883 344 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 PPIFP30405 207 aaKnown RBP14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 ADARB1P78563 741 aaKnown RBP14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 TMEM30BQ3MIR4 351 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 YIF1BQ5BJH7 314 aa14.03□□□□□ -0.16
CHMP2A-208ENST00000601220 C9orf66Q5T8R8 295 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms