RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948		Q6ZTK2	550 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	RBM14	Q96PK6	669 aa	Known RBP	12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	SLC25A33	Q9BSK2	321 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	KCNK15	Q9H427	330 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	TRAPPC2L	Q9UL33	140 aa		12.38	□□□□□ -0.43
PLD3-223	ENST00000600948	MEGF8	Q7Z7M0	2845 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	IGHV3-43	A0A0B4J1X8	118 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	FAM90A9P	A6NNJ1	464 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	TMEM14DP	A8MWL7	114 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	SDCBP	O00560	298 aa	Predicted RBP	12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	OR2F2	O95006	317 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	IGHV3-43D	P0DP04	118 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	RCC1	P18754	421 aa	Predicted RBP	12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	CHAT	P28329	748 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	RPS27A	P62979	156 aa	Known RBP	12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	FABP5	Q01469	135 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	UNC119	Q13432	240 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	TMEM95	Q3KNT9	176 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	C6orf183	Q5T699	404 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	HIST2H2BD	Q6DRA6	164 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	ZNF367	Q7RTV3	350 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	LINC00311	Q8N616	119 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	OR6M1	Q8NGM8	313 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	OR10X1	Q8NGY0	326 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	KCNG3	Q8TAE7	436 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	WIPF2	Q8TF74	440 aa	Predicted RBP	12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	AKR1E2	Q96JD6	320 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	TM2D1	Q9BX74	207 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	TMEM59	Q9BXS4	323 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	WNT10A	Q9GZT5	417 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	MMP27	Q9H306	513 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	ACOT13	Q9NPJ3	140 aa		12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	MBNL3	Q9NUK0	354 aa	Known RBP	12.37	□□□□□ -0.43
PLD3-223	ENST00000600948	SLC17A2	O00624	439 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	ARL6IP5	O75915	188 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	BPNT1	O95861	308 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	HBZ	P02008	142 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	RAB7A	P51149	207 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	GABARAPL2	P60520	117 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	SSX1	Q16384	188 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	C2orf68	Q2NKX9	166 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948		Q3ZCU0	254 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	NKAPL	Q5M9Q1	402 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	TRAT1	Q6PIZ9	186 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	THNSL2	Q86YJ6	484 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	OR8H3	Q8N146	312 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	DRAM1	Q8N682	238 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	C11orf44	Q8N8P7	122 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	C8orf31	Q8N9H6	132 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	OR56B4	Q8NH76	319 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	OR1L1	Q8NH94	360 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	MRPL30	Q8TCC3	161 aa	Known RBP	12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	CAPSL	Q8WWF8	208 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	SULT4A1	Q9BR01	284 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	OCSTAMP	Q9BR26	566 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	NICN1	Q9BSH3	213 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	AK6	Q9Y3D8	172 aa	Known RBP	12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	CMYA5	Q8N3K9	4069 aa		12.36	□□□□□ -0.43
PLD3-223	ENST00000600948	HSD17B6	O14756	317 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	SPINT2	O43291	252 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	AMY1A	P04745	511 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	AMY2A	P04746	511 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	SNRNP70	P08621	437 aa	Known RBP	12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	CALR	P27797	417 aa	Known RBP	12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	VDAC2	P45880	294 aa	Predicted RBP	12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	EMX1	Q04741	257 aa	Predicted RBP	12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	ZNF816	Q0VGE8	651 aa	Predicted RBP	12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	P2RY14	Q15391	338 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	TMEM30B	Q3MIR4	351 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	ARSJ	Q5FYB0	599 aa	Predicted RBP	12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	ZNF439	Q8NDP4	499 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	NEDD4L	Q96PU5	975 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	PLGRKT	Q9HBL7	147 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	RAB9B	Q9NP90	201 aa		12.35	□□□□□ -0.43
PLD3-223	ENST00000600948	NOTCH1	P46531	2555 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948		A0A0A6YYD4	124 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	CCRL2	O00421	344 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	SLC31A2	O15432	143 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	DENR	O43583	198 aa	Known RBP	12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	MRPS14	O60783	128 aa	Known RBP	12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	CSF1	P09603	554 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	FAM106CP	P0CH98	169 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	ABCA11P	Q4W5N1	156 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	SLC25A48	Q6ZT89	311 aa	Known RBP	12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	OR2W3	Q7Z3T1	314 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	C6orf201	Q7Z4U5	140 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	C5orf24	Q7Z6I8	188 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	ZNF554	Q86TJ5	538 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	PRR18	Q8N4B5	295 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	ST6GALNAC6	Q969X2	333 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	LPAR5	Q9H1C0	372 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	TAF9B	Q9HBM6	251 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	GNG12	Q9UBI6	72 aa		12.34	□□□□□ -0.43
PLD3-223	ENST00000600948	IGHV1-3	A0A0C4DH29	117 aa		12.33	□□□□□ -0.44
PLD3-223	ENST00000600948	SH2D7	A6NKC9	451 aa	Predicted RBP	12.33	□□□□□ -0.44
PLD3-223	ENST00000600948	FBXO24	O75426	580 aa		12.33	□□□□□ -0.44
PLD3-223	ENST00000600948	GAPDH	P04406	335 aa	Known RBP	12.33	□□□□□ -0.44
PLD3-223	ENST00000600948	CD28	P10747	220 aa		12.33	□□□□□ -0.44
PLD3-223	ENST00000600948	REG1B	P48304	166 aa		12.33	□□□□□ -0.44
PLD3-223	ENST00000600948	RAB11B	Q15907	218 aa		12.33	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms