RNA–Protein interactions for RNA: ENST00000600456.1

SNRPA-208, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-208ENST00000600456 PECRQ9BY49 303 aa11.21□□□□□ -0.61
SNRPA-208ENST00000600456 ATG5Q9H1Y0 275 aa11.21□□□□□ -0.61
SNRPA-208ENST00000600456 ZNF286AQ9HBT8 521 aa11.21□□□□□ -0.61
SNRPA-208ENST00000600456 CHMP1AQ9HD42 196 aaPredicted RBP11.21□□□□□ -0.61
SNRPA-208ENST00000600456 C12orf4Q9NQ89 552 aa11.21□□□□□ -0.61
SNRPA-208ENST00000600456 MGAT4AQ9UM21 535 aa11.21□□□□□ -0.61
SNRPA-208ENST00000600456 CUBNO60494 3623 aa11.21□□□□□ -0.62
SNRPA-208ENST00000600456 FBN1P35555 2871 aaKnown RBP11.2□□□□□ -0.62
SNRPA-208ENST00000600456 RAB27BO00194 218 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 IGHV4-59P01825 116 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 SNRPBP14678 240 aaKnown RBP11.2□□□□□ -0.62
SNRPA-208ENST00000600456 RCC1P18754 421 aaPredicted RBP11.2□□□□□ -0.62
SNRPA-208ENST00000600456 TGFBR1P36897 503 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 RPS19P39019 145 aaKnown RBP11.2□□□□□ -0.62
SNRPA-208ENST00000600456 HLA-DRB5Q30154 266 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 Q3ZCU0 254 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 BAIAP2L2Q6UXY1 529 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 LHFPL4Q7Z7J7 247 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 C8orf31Q8N9H6 132 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 OR4P4Q8NGL7 312 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 C17orf50Q8WW18 174 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 TAF9BQ9HBM6 251 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 ABRACLQ9P1F3 81 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 AK3Q9UIJ7 227 aa11.2□□□□□ -0.62
SNRPA-208ENST00000600456 AMMECR1Q9Y4X0 333 aaPredicted RBP11.2□□□□□ -0.62
SNRPA-208ENST00000600456 SERPINE3A8MV23 424 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 VGLL3A8MV65 326 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 SDCBPO00560 298 aaPredicted RBP11.19□□□□□ -0.62
SNRPA-208ENST00000600456 HBZP02008 142 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 HIST1H1DP16402 221 aaKnown RBP11.19□□□□□ -0.62
SNRPA-208ENST00000600456 CEACAM3P40198 252 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 RPL5P46777 297 aaKnown RBP11.19□□□□□ -0.62
SNRPA-208ENST00000600456 LOXL3P58215 753 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 RPL15P61313 204 aaKnown RBP11.19□□□□□ -0.62
SNRPA-208ENST00000600456 NCS1P62166 190 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 MRPS15P82914 257 aaKnown RBP11.19□□□□□ -0.62
SNRPA-208ENST00000600456 CTF1Q16619 201 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 LTC4SQ16873 150 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 LRRC75BQ2VPJ9 315 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 GPR107Q5VW38 600 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 ZNF880Q6PDB4 577 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 SLC25A46Q96AG3 418 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 KCTD12Q96CX2 325 aaKnown RBP11.19□□□□□ -0.62
SNRPA-208ENST00000600456 CYYR1Q96J86 154 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 DUX5Q96PT3 197 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 CMSS1Q9BQ75 279 aaKnown RBP11.19□□□□□ -0.62
SNRPA-208ENST00000600456 C19orf24Q9BVV8 132 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 MMP28Q9H239 520 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 RHBDL2Q9NX52 303 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 GFOD1Q9NXC2 390 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 DPM3Q9P2X0 92 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 PSG11Q9UQ72 335 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 COL6A5A8TX70 2615 aa11.19□□□□□ -0.62
SNRPA-208ENST00000600456 FAM172BPA6NC97 362 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 LEUTXA8MZ59 168 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 OOSP1A8MZH6 123 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 BUB1B-PAK6H3BSN5 160 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 J3QR06 171 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 MFNGO00587 321 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 CD3GP09693 182 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 SERPINB10P48595 397 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 DYNLT3P51808 116 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 ARHGDIBP52566 201 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 VBP1P61758 197 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 HTD2P86397 168 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 HMGN3Q15651 99 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 SSX2Q16385 188 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 MOGAT2Q3SYC2 334 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 LDLRAD2Q5SZI1 272 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 C16orf87Q6PH81 154 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 LINC00311Q8N616 119 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.18□□□□□ -0.62
SNRPA-208ENST00000600456 OR1L1Q8NH94 360 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 MDFIQ99750 246 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.18□□□□□ -0.62
SNRPA-208ENST00000600456 GNG12Q9UBI6 72 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 JPT1Q9UK76 154 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 SPATA2Q9UM82 520 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 KCNK7Q9Y2U2 307 aa11.18□□□□□ -0.62
SNRPA-208ENST00000600456 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 A0A0A6YYH2 397 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 A6NJ64 397 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 GNB3P16520 340 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 MADCAM1Q13477 382 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 UTF1Q5T230 341 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 STEAP3Q658P3 488 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 CCDC144NLQ6NUI1 221 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 DYNAPQ8N1N2 210 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 PRR18Q8N4B5 295 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 UBALD1Q8TB05 177 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 SETD6Q8TBK2 473 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 LEAP2Q969E1 77 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 PHF21AQ96BD5 680 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 GALMQ96C23 342 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 SSX3Q99909 188 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 BCL7BQ9BQE9 202 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 CHIAQ9BZP6 476 aa11.17□□□□□ -0.62
SNRPA-208ENST00000600456 NAA50Q9GZZ1 169 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms