RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 OR51A2Q8NGJ7 313 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 OR5D14Q8NGL3 314 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 OR13C3Q8NGS6 347 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 OR10K1Q8NGX5 313 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 UBALD1Q8TB05 177 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 ARL11Q969Q4 196 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 CYYR1Q96J86 154 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 OR5B12Q96R08 314 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 RASL11BQ9BPW5 248 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 DPCDQ9BVM2 203 aaPredicted RBP4.71□□□□□ -1.66
VRK3-220ENST00000600259 GABARAPL3Q9BY60 117 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 TOLLIPQ9H0E2 274 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 ALX4Q9H161 411 aaPredicted RBP4.71□□□□□ -1.66
VRK3-220ENST00000600259 RIBC2Q9H4K1 309 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 NEK6Q9HC98 313 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 FAM53CQ9NYF3 392 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 NKX1-2Q9UD57 310 aaPredicted RBP4.71□□□□□ -1.66
VRK3-220ENST00000600259 ZNF107Q9UII5 783 aaPredicted RBP4.71□□□□□ -1.66
VRK3-220ENST00000600259 EXOGQ9Y2C4 368 aaKnown RBP4.71□□□□□ -1.66
VRK3-220ENST00000600259 WSB1Q9Y6I7 421 aa4.71□□□□□ -1.66
VRK3-220ENST00000600259 IGHV3-43A0A0B4J1X8 118 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 DAPL1A0PJW8 107 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 C12orf77C9JDV5 145 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 J3QLW9 94 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 GEMIN2O14893 280 aaKnown RBP4.7□□□□□ -1.66
VRK3-220ENST00000600259 LDLRAD4O15165 306 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ATP6V0E1O15342 81 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 LANCL1O43813 399 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 CDRT1O95170 752 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 HLA-DRB1P01911 266 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 IGHV3-43DP0DP04 118 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 IGHV4-30-4P0DP06 118 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ZNF19P17023 458 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 VDAC1P21796 283 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 CNTFRP26992 372 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ATP6V1E1P36543 226 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 CRIP2P52943 208 aaPredicted RBP4.7□□□□□ -1.66
VRK3-220ENST00000600259 SLURP1P55000 103 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 LSAMPQ13449 338 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 STEAP3Q658P3 488 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ZNF497Q6ZNH5 498 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 FAM220AQ7Z4H9 259 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 C5orf24Q7Z6I8 188 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ZDHHC13Q8IUH4 622 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ODF3L1Q8IXM7 274 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 GAPTQ8N292 157 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ACBD7Q8N6N7 88 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 CCDC107Q8WV48 283 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 TNFAIP8L1Q8WVP5 186 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 TRUB1Q8WWH5 349 aaKnown RBP4.7□□□□□ -1.66
VRK3-220ENST00000600259 RGP1Q92546 391 aaPredicted RBP4.7□□□□□ -1.66
VRK3-220ENST00000600259 RFKQ969G6 155 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 C4orf36Q96KX1 117 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 OR51J1Q9H342 316 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ZMAT4Q9H898 229 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ISG20L2Q9H9L3 353 aaKnown RBP4.7□□□□□ -1.66
VRK3-220ENST00000600259 ISYNA1Q9NPH2 558 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 IL36GQ9NZH8 169 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 ST3GAL6Q9Y274 331 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 FBXO7Q9Y3I1 522 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 NUBP2Q9Y5Y2 271 aa4.7□□□□□ -1.66
VRK3-220ENST00000600259 IGHV4OR15-8A0A075B7B6 117 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 A0A087WW49 117 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 TRAV41A0A0B4J266 112 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 A0A1W2PP11 408 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 TMEM30CPA0ZSE6 113 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 LINC01619G3V211 115 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 SDCBPO00560 298 aaPredicted RBP4.69□□□□□ -1.66
VRK3-220ENST00000600259 LCE2BO14633 110 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 SAP30O75446 220 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 NDUFA3O95167 84 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 HTR3BO95264 441 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 IGLV1-51P01701 117 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 OCM2P0CE71 109 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 OCMP0CE72 109 aaPredicted RBP4.69□□□□□ -1.66
VRK3-220ENST00000600259 OR5H8P0DN80 308 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 SLC2A2P11168 524 aaPredicted RBP4.69□□□□□ -1.66
VRK3-220ENST00000600259 GABRB1P18505 474 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 RBM11P57052 281 aaKnown RBP4.69□□□□□ -1.66
VRK3-220ENST00000600259 SNRPGP62308 76 aaKnown RBP4.69□□□□□ -1.66
VRK3-220ENST00000600259 ADARB1P78563 741 aaKnown RBP4.69□□□□□ -1.66
VRK3-220ENST00000600259 NDPQ00604 133 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 LPCAT4Q643R3 524 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 TMEM65Q6PI78 240 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 LHFPL3Q86UP9 236 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 SYS1Q8N2H4 156 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 CCDC197Q8NCU1 140 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 NPBQ8NG41 125 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 OR52N1Q8NH53 320 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 ARPC1AQ92747 370 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 LGALS12Q96DT0 336 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 RHOVQ96L33 236 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 NABP2Q9BQ15 211 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 PDCD1LG2Q9BQ51 273 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 THAP7Q9BT49 309 aaPredicted RBP4.69□□□□□ -1.66
VRK3-220ENST00000600259 ANKRD60Q9BZ19 345 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 PALMDQ9NP74 551 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 FAM118AQ9NWS6 357 aa4.69□□□□□ -1.66
VRK3-220ENST00000600259 RCC2Q9P258 522 aaKnown RBP4.69□□□□□ -1.66
VRK3-220ENST00000600259 AASSQ9UDR5 926 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms