RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 EHFQ9NZC4 300 aa12.79□□□□□ -0.36
VRK3-218ENST00000600031 PKDREJQ9NTG1 2253 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 FAM74A7A6NL05 159 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 NXPH2O95156 264 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 MPV17LQ2QL34 196 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 ANKRD55Q3KP44 614 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 FAM74A3Q4VXF1 159 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 IL34Q6ZMJ4 242 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 ITLN1Q8WWA0 313 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 HES4Q9HCC6 221 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 MMP26Q9NRE1 261 aa12.78□□□□□ -0.36
VRK3-218ENST00000600031 CACNA1DQ01668 2161 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 VSTM5A8MXK1 200 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 PRSS44E7EML9 344 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 TAAR5O14804 337 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 SIGLEC5O15389 551 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 KCNAB3O43448 404 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 PMELP40967 661 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 FLI1Q01543 452 aaPredicted RBP12.77□□□□□ -0.36
VRK3-218ENST00000600031 IL15RAQ13261 267 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 IL13RA2Q14627 380 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 C10orf91Q5T1B1 145 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 ZCCHC24Q8N2G6 241 aaKnown RBP12.77□□□□□ -0.36
VRK3-218ENST00000600031 RCC2Q9P258 522 aaKnown RBP12.77□□□□□ -0.36
VRK3-218ENST00000600031 ZDHHC8Q9ULC8 765 aa12.77□□□□□ -0.36
VRK3-218ENST00000600031 C14orf166Q9Y224 244 aaKnown RBP12.77□□□□□ -0.36
VRK3-218ENST00000600031 C19orf84I3L1E1 186 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 H2AFB1P0C5Y9 115 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 RPS2P15880 293 aaKnown RBP12.77□□□□□ -0.37
VRK3-218ENST00000600031 TNFAIP6P98066 277 aaPredicted RBP12.77□□□□□ -0.37
VRK3-218ENST00000600031 CHRFAM7AQ494W8 412 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 EIF5AL1Q6IS14 154 aaKnown RBP12.77□□□□□ -0.37
VRK3-218ENST00000600031 LINC00596Q86U02 117 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 MOGAT3Q86VF5 341 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 BOLLQ8N9W6 283 aaKnown RBP12.77□□□□□ -0.37
VRK3-218ENST00000600031 TMED6Q8WW62 240 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 MAFIPQ8WZ33 124 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 SAT2Q96F10 170 aaPredicted RBP12.77□□□□□ -0.37
VRK3-218ENST00000600031 CISD1Q9NZ45 108 aaKnown RBP12.77□□□□□ -0.37
VRK3-218ENST00000600031 OR5AC2Q9NZP5 309 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 CARHSP1Q9Y2V2 147 aaKnown RBP12.77□□□□□ -0.37
VRK3-218ENST00000600031 ABCA4P78363 2273 aa12.77□□□□□ -0.37
VRK3-218ENST00000600031 HSPB6O14558 160 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 FAM157CP0CG43 387 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 PI3P19957 117 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 GLRA1P23415 457 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 APOBEC3AP31941 199 aaPredicted RBP12.76□□□□□ -0.37
VRK3-218ENST00000600031 ARHGDIBP52566 201 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 MST1LQ2TV78 715 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 Q6P435 159 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 LRRC29Q8WV35 223 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 OR10C1Q96KK4 312 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 CMSS1Q9BQ75 279 aaKnown RBP12.76□□□□□ -0.37
VRK3-218ENST00000600031 TMEM204Q9BSN7 226 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 SLC5A7Q9GZV3 580 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 IL19Q9UHD0 177 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 TRAV24A0A0B4J272 114 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 FAM221AA4D161 298 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 MSGN1A6NI15 193 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 C17orf100A8MU93 164 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 SDCBPO00560 298 aaPredicted RBP12.76□□□□□ -0.37
VRK3-218ENST00000600031 HS3ST1O14792 307 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 PJVKQ0ZLH3 352 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 RAB32Q13637 225 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 ZNF146Q15072 292 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 ZNF672Q499Z4 452 aaPredicted RBP12.76□□□□□ -0.37
VRK3-218ENST00000600031 PUSL1Q8N0Z8 303 aaKnown RBP12.76□□□□□ -0.37
VRK3-218ENST00000600031 ZNF462Q96JM2 2506 aa12.76□□□□□ -0.37
VRK3-218ENST00000600031 DEGS1O15121 323 aa12.75□□□□□ -0.37
VRK3-218ENST00000600031 EGR1P18146 543 aa12.75□□□□□ -0.37
VRK3-218ENST00000600031 GATA4P43694 442 aa12.75□□□□□ -0.37
VRK3-218ENST00000600031 ACP7Q6ZNF0 438 aa12.75□□□□□ -0.37
VRK3-218ENST00000600031 SUMF2Q8NBJ7 301 aa12.75□□□□□ -0.37
VRK3-218ENST00000600031 RDH5Q92781 318 aa12.75□□□□□ -0.37
VRK3-218ENST00000600031 ZNF701Q9NV72 531 aaPredicted RBP12.75□□□□□ -0.37
VRK3-218ENST00000600031 LPAR3Q9UBY5 353 aa12.75□□□□□ -0.37
VRK3-218ENST00000600031 EDARQ9UNE0 448 aa12.75□□□□□ -0.37
VRK3-218ENST00000600031 IGKV1D-8A0A087WSZ0 117 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 F8W036 122 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 NDUFA2O43678 99 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 OR2H2O95918 312 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 IFNA2P01563 188 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 ADH4P08319 380 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 ZNF44P15621 663 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 TNFSF4P23510 183 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 CFHR2P36980 270 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 CEBPDP49716 269 aaPredicted RBP12.74□□□□□ -0.37
VRK3-218ENST00000600031 BLOC1S1P78537 153 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 CCL8P80075 99 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 EFNB3Q15768 340 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 SEC11CQ9BY50 192 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 IFT22Q9H7X7 185 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 GCM1Q9NP62 436 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 TREM2Q9NZC2 230 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 ZNF705EA8MWA4 302 aaPredicted RBP12.74□□□□□ -0.37
VRK3-218ENST00000600031 GPR31O00270 319 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 FCGR3AP08637 254 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 ADCYAP1P18509 176 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 Q6ZPA2 131 aa12.74□□□□□ -0.37
VRK3-218ENST00000600031 SPAG16Q8N0X2 631 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms