RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, human

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAF1-208	ENST00000598594	SLC25A1	P53007	311 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	CTBP2	P56545	445 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	C1QTNF8	P60827	252 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	RPS24	P62847	133 aa	Known RBP	4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	HLA-DRB3	P79483	266 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	PAX8	Q06710	450 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	FZD2	Q14332	565 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	RNF212	Q495C1	297 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	WDR38	Q5JTN6	314 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	C10orf25	Q5T742	122 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	TMEM236	Q5W0B7	351 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	ZNF613	Q6PF04	617 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	TEX43	Q6ZNM6	134 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	C17orf82	Q86X59	251 aa	Predicted RBP	4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	KLHDC8B	Q8IXV7	354 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	C20orf196	Q8IYI0	205 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	CIART	Q8N365	385 aa	Predicted RBP	4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	SLC30A7	Q8NEW0	376 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	THEM6	Q8WUY1	208 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	GEMIN6	Q8WXD5	167 aa	Known RBP	4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	OR5P3	Q8WZ94	311 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	GALNT14	Q96FL9	552 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	NARS2	Q96I59	477 aa	Known RBP	4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	PRSS27	Q9BQR3	290 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	TMEM70	Q9BUB7	260 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	GABARAPL3	Q9BY60	117 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	KRTAP9-3	Q9BYQ3	159 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	C20orf27	Q9GZN8	174 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	TMEM222	Q9H0R3	208 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	IL25	Q9H293	177 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	HES4	Q9HCC6	221 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	TRMT112	Q9UI30	125 aa	Known RBP	4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	SIGLEC7	Q9Y286	467 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	WASHC3	Q9Y3C0	194 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	RTL1	A6NKG5	1358 aa		4.12	□□□□□ -1.75
PAF1-208	ENST00000598594	WNK3	Q9BYP7	1800 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	BAZ1B	Q9UIG0	1483 aa	Known RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	RAPGEF2	Q9Y4G8	1499 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	SMIM26	A0A096LP01	95 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594		A0A0J9YXV3	536 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	WI2-2373I1.2	A0A1W2PRP0	233 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594		A0A1W2PS18	150 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	PGP	A6NDG6	321 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	FAM220BP	B1ANY3	271 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	INMT-MINDY4	F8WBC2	141 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	UPK2	O00526	184 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	NDUFC2	O95298	119 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	CA2	P00918	260 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	CSN2	P05814	226 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	ZNF806	P0C7X5	589 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	FOLR2	P14207	255 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	RPL7	P18124	248 aa	Known RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	ORM2	P19652	201 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	IGHV1-2	P23083	117 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	BLVRB	P30043	206 aa	Predicted RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	DAD1	P61803	113 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	SNRPD2	P62316	118 aa	Known RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	RAP1A	P62834	184 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	RPS28	P62857	69 aa	Known RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	PLP2	Q04941	152 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	FCN2	Q15485	313 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	KCNJ8	Q15842	424 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	TAF9	Q16594	264 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	C17orf58	Q2M2W7	97 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	CENPW	Q5EE01	88 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	C1orf100	Q5SVJ3	147 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	HAGHL	Q6PII5	290 aa	Predicted RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	ARL9	Q6T311	187 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	OR8S1	Q8NH09	359 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	OR10G6	Q8NH81	332 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	PRSS3P2	Q8NHM4	247 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	FLVCR1-AS1	Q8TAF5	88 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	CT55	Q8WUE5	264 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	DCUN1D4	Q92564	292 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	ZNF689	Q96CS4	500 aa	Predicted RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	FXYD5	Q96DB9	178 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	SLC25A44	Q96H78	314 aa	Predicted RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	OR7D2	Q96RA2	312 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	LYSMD1	Q96S90	227 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	ZNF649	Q9BS31	505 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	PDCD10	Q9BUL8	212 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	LRRC61	Q9BV99	259 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	TMEM147	Q9BVK8	224 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	SLC29A3	Q9BZD2	475 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	OR52D1	Q9H346	318 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	SRMS	Q9H3Y6	488 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	NOX3	Q9HBY0	568 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	ZNF331	Q9NQX6	463 aa	Predicted RBP	4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	UBQLN4	Q9NRR5	601 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	MED11	Q9P086	117 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	CLCF1	Q9UBD9	225 aa		4.11	□□□□□ -1.75
PAF1-208	ENST00000598594	NUP210	Q8TEM1	1887 aa	Predicted RBP	4.1	□□□□□ -1.75
PAF1-208	ENST00000598594	TRAV8-3	A0A0A6YYJ7	113 aa		4.1	□□□□□ -1.75
PAF1-208	ENST00000598594	NKX2-6	A6NCS4	301 aa		4.1	□□□□□ -1.75
PAF1-208	ENST00000598594	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	4.1	□□□□□ -1.75
PAF1-208	ENST00000598594	GNG7	O60262	68 aa		4.1	□□□□□ -1.75
PAF1-208	ENST00000598594	KBTBD11	O94819	623 aa		4.1	□□□□□ -1.75
PAF1-208	ENST00000598594	DUS4L	O95620	317 aa	Known RBP	4.1	□□□□□ -1.75
PAF1-208	ENST00000598594	FAM107A	O95990	144 aa		4.1	□□□□□ -1.75
PAF1-208	ENST00000598594	TRBV12-3	P01733	135 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms