RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 OVOL1O14753 267 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 GEMIN2O14893 280 aaKnown RBP7.72□□□□□ -1.17
LIG1-209ENST00000596104 TXNL1O43396 289 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 OR7C1O76099 320 aaPredicted RBP7.72□□□□□ -1.17
LIG1-209ENST00000596104 CDRT1O95170 752 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 HTR3BO95264 441 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 MT-ND4P03905 459 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 RPSAP08865 295 aaKnown RBP7.72□□□□□ -1.17
LIG1-209ENST00000596104 SLC2A2P11168 524 aaPredicted RBP7.72□□□□□ -1.17
LIG1-209ENST00000596104 SPNP16150 400 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 ZNF134P52741 427 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 SNRPGP62308 76 aaKnown RBP7.72□□□□□ -1.17
LIG1-209ENST00000596104 LSAMPQ13449 338 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 GALEQ14376 348 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 CT45A1Q5HYN5 189 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 ZNF497Q6ZNH5 498 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 LHFPL3Q86UP9 236 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 SATL1Q86VE3 508 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 OR52N1Q8NH53 320 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 CT45A3Q8NHU0 189 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 CCDC107Q8WV48 283 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 RGP1Q92546 391 aaPredicted RBP7.72□□□□□ -1.17
LIG1-209ENST00000596104 LGALS12Q96DT0 336 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 GPER1Q99527 375 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 ALG8Q9BVK2 526 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 FAM192AQ9GZU8 254 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 PALMDQ9NP74 551 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 IMPAD1Q9NX62 359 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 TAS2R4Q9NYW5 299 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 DHDHQ9UQ10 334 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 WSB1Q9Y6I7 421 aa7.72□□□□□ -1.17
LIG1-209ENST00000596104 DNAH1Q9P2D7 4330 aa7.71□□□□□ -1.17
LIG1-209ENST00000596104 TRIM64CA6NLI5 447 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 C12orf77C9JDV5 145 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 ATP6V0E1O15342 81 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 MAGEB3O15480 346 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 LANCL1O43813 399 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 FCGR1AP12314 374 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 GP9P14770 177 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 MYF6P23409 242 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 SOX2P48431 317 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 MMDQ15546 238 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 MPV17LQ2QL34 196 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 MEDAGQ5VYS4 303 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 ZFAND6Q6FIF0 208 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 OR5AK2Q8NH90 309 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 TSEN15Q8WW01 171 aaKnown RBP7.71□□□□□ -1.18
LIG1-209ENST00000596104 DLX4Q92988 240 aaPredicted RBP7.71□□□□□ -1.18
LIG1-209ENST00000596104 CENPNQ96H22 339 aaPredicted RBP7.71□□□□□ -1.18
LIG1-209ENST00000596104 TM2D3Q9BRN9 247 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 JAM3Q9BX67 310 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 OR51J1Q9H342 316 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 ZMAT4Q9H898 229 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 EDA2RQ9HAV5 297 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 TPSG1Q9NRR2 321 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 AASSQ9UDR5 926 aa7.71□□□□□ -1.18
LIG1-209ENST00000596104 IGHV7-81A0A0B4J1V7 117 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 TRAV41A0A0B4J266 112 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 A0A1W2PP11 408 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 MAGEA13PA6NCF6 341 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 SAC3D1A6NKF1 404 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 AIPO00170 330 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 SOX15O60248 233 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 SAP30O75446 220 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 HLA-DRB1P01911 266 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 GABRB1P18505 474 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 RAB9AP51151 201 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 SLURP1P55000 103 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 MRPL28Q13084 256 aaKnown RBP7.7□□□□□ -1.18
LIG1-209ENST00000596104 DOC2BQ14184 412 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 TMEM30BQ3MIR4 351 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 C19orf54Q5BKX5 351 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 STEAP3Q658P3 488 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 ACSM6Q6P461 480 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 TMEM65Q6PI78 240 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 LINC00596Q86U02 117 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 GAPTQ8N292 157 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 MINDY2Q8NBR6 621 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 OR10V1Q8NGI7 309 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 MRPL48Q96GC5 212 aaKnown RBP7.7□□□□□ -1.18
LIG1-209ENST00000596104 RITA1Q96K30 269 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 TOLLIPQ9H0E2 274 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 ALX4Q9H161 411 aaPredicted RBP7.7□□□□□ -1.18
LIG1-209ENST00000596104 METTL9Q9H1A3 318 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 PARP11Q9NR21 331 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 ERVK13-1Q9NX77 482 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 RCC2Q9P258 522 aaKnown RBP7.7□□□□□ -1.18
LIG1-209ENST00000596104 GNG12Q9UBI6 72 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 ING4Q9UNL4 249 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 SORL1Q92673 2214 aa7.7□□□□□ -1.18
LIG1-209ENST00000596104 HBZP02008 142 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 CSTBP04080 98 aaKnown RBP7.69□□□□□ -1.18
LIG1-209ENST00000596104 ALPLP05186 524 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 SERPINA2P20848 420 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 CNTFRP26992 372 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 BLVRBP30043 206 aaPredicted RBP7.69□□□□□ -1.18
LIG1-209ENST00000596104 ZNF93P35789 620 aaPredicted RBP7.69□□□□□ -1.18
LIG1-209ENST00000596104 GTF2A1P52655 376 aaPredicted RBP7.69□□□□□ -1.18
LIG1-209ENST00000596104 ACTBP60709 375 aa7.69□□□□□ -1.18
LIG1-209ENST00000596104 ADARB1P78563 741 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms