RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 RHBDL2Q9NX52 303 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 SPATA2Q9UM82 520 aa11.66□□□□□ -0.54
LIG1-208ENST00000595758 A0A075B6Q4 140 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 TRBV6-6A0A0A6YYG2 114 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 CLDN34H7C241 214 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 F2RL2O00254 374 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 SDCBPO00560 298 aaPredicted RBP11.65□□□□□ -0.54
LIG1-208ENST00000595758 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
LIG1-208ENST00000595758 SCGNO76038 276 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 CD3GP09693 182 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 HIST1H1DP16402 221 aaKnown RBP11.65□□□□□ -0.54
LIG1-208ENST00000595758 GNB3P16520 340 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 HTR1DP28221 377 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 UBA52P62987 128 aaKnown RBP11.65□□□□□ -0.54
LIG1-208ENST00000595758 MRPS15P82914 257 aaKnown RBP11.65□□□□□ -0.54
LIG1-208ENST00000595758 ARL6IP1Q15041 203 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 SLC9A3R2Q15599 337 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 MINOS1Q5TGZ0 78 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 MOB1BQ7L9L4 216 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 PRR18Q8N4B5 295 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 BEND2Q8NDZ0 799 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 OR52M1Q8NGK5 317 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 OR9G1Q8NH87 305 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 OR1L1Q8NH94 360 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 NDNFQ8TB73 568 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 SSMEM1Q8WWF3 244 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 LEAP2Q969E1 77 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 DUX5Q96PT3 197 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 CMSS1Q9BQ75 279 aaKnown RBP11.65□□□□□ -0.54
LIG1-208ENST00000595758 HDHD3Q9BSH5 251 aaPredicted RBP11.65□□□□□ -0.54
LIG1-208ENST00000595758 DCSTAMPQ9H295 470 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 ZMAT3Q9HA38 289 aaKnown RBP11.65□□□□□ -0.54
LIG1-208ENST00000595758 KCNK7Q9Y2U2 307 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 MINOS1-NBL1R4GNA1 71 aa11.65□□□□□ -0.54
LIG1-208ENST00000595758 CUBNO60494 3623 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 POM121CA8CG34 1229 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 MFNGO00587 321 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 IGLV1-47P01700 117 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 IGHV3-7P01780 117 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 IGHV4-59P01825 116 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 IER3P46695 156 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 RORCP51449 518 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 TMBIM6P55061 237 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 LOXL3P58215 753 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 TMEM30BQ3MIR4 351 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 CDNFQ49AH0 187 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 LDLRAD2Q5SZI1 272 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 ZNF880Q6PDB4 577 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 TMEM86BQ8N661 226 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 OR4P4Q8NGL7 312 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 ZFAND2BQ8WV99 257 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 TMEM158Q8WZ71 300 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 PHF21AQ96BD5 680 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 KCTD12Q96CX2 325 aaKnown RBP11.64□□□□□ -0.55
LIG1-208ENST00000595758 SLC25A38Q96DW6 304 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 MEGF9Q9H1U4 602 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 DPAGT1Q9H3H5 408 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 TNFRSF19Q9NS68 423 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 ZNRD1Q9P1U0 126 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 DPM3Q9P2X0 92 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 GNG12Q9UBI6 72 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 PSG11Q9UQ72 335 aa11.64□□□□□ -0.55
LIG1-208ENST00000595758 IGHV3-43A0A0B4J1X8 118 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 SERPINE3A8MV23 424 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 J3QR06 171 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 IGHV3-43DP0DP04 118 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 PAX6P26367 422 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 ARFRP1Q13795 201 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 HMGN3Q15651 99 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 SSX2Q16385 188 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 HLA-DRB5Q30154 266 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 Q6ZPA2 131 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 C5orf24Q7Z6I8 188 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 RAB2BQ8WUD1 216 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 CREB3L1Q96BA8 519 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 GALMQ96C23 342 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 MMP28Q9H239 520 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 Q9N2K0 584 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 MGAT4AQ9UM21 535 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 HILPDAQ9Y5L2 63 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 POMT1Q9Y6A1 747 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 COL6A5A8TX70 2615 aa11.63□□□□□ -0.55
LIG1-208ENST00000595758 A0A0A6YYH2 397 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 BTBD17A6NE02 478 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 A6NJ64 397 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 RNF212BA8MTL3 300 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 LEUTXA8MZ59 168 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 BUB1B-PAK6H3BSN5 160 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 NOL3O60936 208 aaKnown RBP11.62□□□□□ -0.55
LIG1-208ENST00000595758 RNASE1P07998 156 aaKnown RBP11.62□□□□□ -0.55
LIG1-208ENST00000595758 GSTP1P09211 210 aaKnown RBP11.62□□□□□ -0.55
LIG1-208ENST00000595758 TALDO1P37837 337 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 CEACAM3P40198 252 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 GNG10P50151 68 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 HTD2P86397 168 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 AANATQ16613 207 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 LRRC75BQ2VPJ9 315 aa11.62□□□□□ -0.55
LIG1-208ENST00000595758 KRTAP24-1Q3LI83 254 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms