RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, human

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-208	ENST00000594387	SC5D	O75845	299 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	OR2F2	O95006	317 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	BPNT1	O95861	308 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	GAPDH	P04406	335 aa	Known RBP	13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	RPS25	P62851	125 aa	Known RBP	13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	BLCAP	P62952	87 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	TBCE	Q15813	527 aa	Predicted RBP	13.92	□□□□□ -0.18
IRF3-208	ENST00000594387		Q3ZCU0	254 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	ZNF367	Q7RTV3	350 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	THNSL2	Q86YJ6	484 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	OR8H3	Q8N146	312 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387		Q8N2B8	174 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	SVOP	Q8N4V2	548 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	RBM14	Q96PK6	669 aa	Known RBP	13.92	□□□□□ -0.18
IRF3-208	ENST00000594387	LRRC42	Q9Y546	428 aa		13.92	□□□□□ -0.18
IRF3-208	ENST00000594387		A0A1W2PPE3	182 aa		13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	MRPS14	O60783	128 aa	Known RBP	13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	VSIG8	P0DPA2	414 aa		13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	ARSB	P15848	533 aa		13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	CALR	P27797	417 aa	Known RBP	13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	GP2	P55259	537 aa	Known RBP	13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	HABP2	Q14520	560 aa	Predicted RBP	13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	C11orf44	Q8N8P7	122 aa		13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	OCSTAMP	Q9BR26	566 aa		13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	GFOD1	Q9NXC2	390 aa		13.91	□□□□□ -0.18
IRF3-208	ENST00000594387	IGHV3-43	A0A0B4J1X8	118 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	C12orf77	C9JDV5	145 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	C15orf65	H3BRN8	121 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	CCRL2	O00421	344 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	PDCD5	O14737	125 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	HSD17B6	O14756	317 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	FBXO24	O75426	580 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	IGHV3-43D	P0DP04	118 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	TMEM11	P17152	192 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	GABARAPL2	P60520	117 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	RPS27A	P62979	156 aa	Known RBP	13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	EMX1	Q04741	257 aa	Predicted RBP	13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	C9orf152	Q5JTZ5	239 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	OR10K2	Q6IF99	312 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	TMEM91	Q6ZNR0	172 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	CENPV	Q7Z7K6	275 aa	Predicted RBP	13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	MOB3B	Q86TA1	216 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	ZNF554	Q86TJ5	538 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	LINC00311	Q8N616	119 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	C8orf31	Q8N9H6	132 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	UBALD1	Q8TB05	177 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	OR2S2	Q9NQN1	319 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	PLEKHJ1	Q9NW61	149 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	ABRACL	Q9P1F3	81 aa		13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	AK6	Q9Y3D8	172 aa	Known RBP	13.9	□□□□□ -0.18
IRF3-208	ENST00000594387	SLC17A2	O00624	439 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	SLC22A1	O15245	554 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	RGS11	O94810	467 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	HBZ	P02008	142 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	SNRNP70	P08621	437 aa	Known RBP	13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	BLVRB	P30043	206 aa	Predicted RBP	13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	RAB11B	Q15907	218 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	ABCA11P	Q4W5N1	156 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	UTF1	Q5T230	341 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	OR2W3	Q7Z3T1	314 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	DRAM1	Q8N682	238 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	OR56B4	Q8NH76	319 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	TAF9B	Q9HBM6	251 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	SERTAD4	Q9NUC0	356 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	MOB4	Q9Y3A3	225 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387		V9GY05	133 aa		13.89	□□□□□ -0.19
IRF3-208	ENST00000594387	TXNL1	O43396	289 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	RCC1	P18754	421 aa	Predicted RBP	13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	MYL9	P24844	172 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	LOXL3	P58215	753 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	FABP5	Q01469	135 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	ZNF816	Q0VGE8	651 aa	Predicted RBP	13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	P2RY14	Q15391	338 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	SIGIRR	Q6IA17	410 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	GAPT	Q8N292	157 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	SETD6	Q8TBK2	473 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	CFHR4	Q92496	578 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	GALM	Q96C23	342 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	FAAP24	Q9BTP7	215 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	TM2D1	Q9BX74	207 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	YTHDF1	Q9BYJ9	559 aa	Known RBP	13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	RIMS4	Q9H426	269 aa	Predicted RBP	13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	ANK2	Q01484	3957 aa		13.88	□□□□□ -0.19
IRF3-208	ENST00000594387	TMEM14DP	A8MWL7	114 aa		13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	DENR	O43583	198 aa	Known RBP	13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	CD37	P11049	281 aa		13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	CHAT	P28329	748 aa		13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	HNF4G	Q14541	408 aa		13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	STEAP3	Q658P3	488 aa		13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	C6orf201	Q7Z4U5	140 aa		13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	OR10V1	Q8NGI7	309 aa		13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	OR1L1	Q8NH94	360 aa		13.87	□□□□□ -0.19
IRF3-208	ENST00000594387	IGHV1-3	A0A0C4DH29	117 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387		A0A1W2PPI3	338 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	FAM90A9P	A6NNJ1	464 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	IGKV1D-33	P01593	117 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	IGKV1-33	P01594	117 aa		13.86	□□□□□ -0.19
IRF3-208	ENST00000594387	UNC119	Q13432	240 aa		13.86	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 89 ms