RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PRAF2O60831 178 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 IL5P05113 134 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 LYNX1P0DP58 116 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 GZMHP20718 246 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 GLIPR1P48060 266 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 EFNA4P52798 201 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 P2RX3P56373 397 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 TMEM33P57088 247 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 RAB25P57735 213 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 SEC61A1P61619 476 aaKnown RBP11.18□□□□□ -0.62
VMP1-217ENST00000593168 SURF2Q15527 256 aaPredicted RBP11.18□□□□□ -0.62
VMP1-217ENST00000593168 TATDN3Q17R31 274 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 IGSF11Q5DX21 431 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 AADACL3Q5VUY0 350 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 LRRC75A-AS1Q8N1F1 130 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 MUC20Q8N307 709 aaPredicted RBP11.18□□□□□ -0.62
VMP1-217ENST00000593168 TMEM185AQ8NFB2 350 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 MRGPRFQ96AM1 343 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 TMEM246Q9BRR3 403 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 ZNF2Q9BSG1 426 aaPredicted RBP11.18□□□□□ -0.62
VMP1-217ENST00000593168 CABLES2Q9BTV7 478 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 TAF9BQ9HBM6 251 aa11.18□□□□□ -0.62
VMP1-217ENST00000593168 CUBNO60494 3623 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 TRBV6-7A0A0A0MS04 114 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 TRAV39A0A0B4J263 110 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 A0A0B4J293 547 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 IGKV1-6A0A0C4DH72 117 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 C7orf66A4D0T2 115 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 OR5H14A6NHG9 310 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 ADAM20O43506 726 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 IGHV2-70P01814 119 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 RLN1P04808 185 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 SELLP14151 372 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 FPR2P25090 351 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 FCGR2CP31995 323 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 CDKN1AP38936 164 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 EDDM3AQ14507 147 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 HERPUD1Q15011 391 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 CADM3Q8N126 398 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 FAM216BQ8N7L0 139 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 ZNF565Q8N9K5 539 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 CHAC2Q8WUX2 184 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 RAB1CQ92928 201 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 TIMD4Q96H15 378 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 CHODLQ9H9P2 273 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 OR6C3Q9NZP0 311 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 GPR132Q9UNW8 380 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 TLN2Q9Y4G6 2542 aa11.17□□□□□ -0.62
VMP1-217ENST00000593168 ARID1AO14497 2285 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 A0A1B0GW55 424 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 C12orf77C9JDV5 145 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 NDUFB3O43676 98 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 TUSC2O75896 110 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 DUX4L2P0CJ85 424 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 DUX4L3P0CJ86 424 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 DUX4L4P0CJ87 422 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 DUX4L5P0CJ88 424 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 DUX4L6P0CJ89 424 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 DUX4L7P0CJ90 424 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 UCP3P55916 312 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 TMEM155Q4W5P6 130 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 LRRC10Q5BKY1 277 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 DUX4L9Q6RFH8 374 aaPredicted RBP11.16□□□□□ -0.62
VMP1-217ENST00000593168 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 TPRX1Q8N7U7 411 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 OR13A1Q8NGR1 328 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 MARCH1Q8TCQ1 289 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 MOB3AQ96BX8 217 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 KIRREL1Q96J84 757 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 DUX4Q9UBX2 424 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 SLC25A10Q9UBX3 287 aaPredicted RBP11.16□□□□□ -0.62
VMP1-217ENST00000593168 VSIG4Q9Y279 399 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 ALG5Q9Y673 324 aa11.16□□□□□ -0.62
VMP1-217ENST00000593168 KIAA2026Q5HYC2 2103 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 C15orf65H3BRN8 121 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 BET1O15155 118 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 LY6HO94772 140 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 CGB3P0DN86 165 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 CGB7P0DN87 165 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 ANXA7P20073 488 aaKnown RBP11.15□□□□□ -0.62
VMP1-217ENST00000593168 NPY4RP50391 375 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 EDDM3BP56851 147 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 MEF2CQ06413 473 aaPredicted RBP11.15□□□□□ -0.62
VMP1-217ENST00000593168 METTL11BQ5VVY1 283 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 FAHD2BQ6P2I3 314 aaPredicted RBP11.15□□□□□ -0.62
VMP1-217ENST00000593168 PRSS57Q6UWY2 283 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 LYPD2Q6UXB3 125 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 GLDNQ6ZMI3 551 aaPredicted RBP11.15□□□□□ -0.62
VMP1-217ENST00000593168 OR10J5Q8NHC4 309 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 MRGPRDQ8TDS7 321 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 CORO2AQ92828 525 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 GALMQ96C23 342 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 FAHD2AQ96GK7 314 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 TOLLIPQ9H0E2 274 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 GHITMQ9H3K2 345 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 GPN1Q9HCN4 374 aaPredicted RBP11.15□□□□□ -0.62
VMP1-217ENST00000593168 RAB9BQ9NP90 201 aa11.15□□□□□ -0.62
VMP1-217ENST00000593168 HIVEP2P31629 2446 aa11.15□□□□□ -0.63
VMP1-217ENST00000593168 USF3Q68DE3 2245 aa11.15□□□□□ -0.63
VMP1-217ENST00000593168 A0A0A6YYJ9 748 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms