RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 ZDHHC8Q9ULC8 765 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ATP23Q9Y6H3 246 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TNRC18O15417 2968 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 PRRC2BQ5JSZ5 2229 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 KIAA1549LQ6ZVL6 1849 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OBSL1O75147 1896 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TRBV24-1A0A075B6N3 115 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TRBV9A0A0B4J1U6 114 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 UBE2L5PA0A1B0GUS4 154 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR2W5A6NFC9 320 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SIGLEC5O15389 551 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 PRKNO60260 465 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 SCGB2A1O75556 95 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TRGC2P03986 189 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 RPLP1P05386 114 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 ADCYAP1P18509 176 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CSRP1P21291 193 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 UCP1P25874 307 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CDC34P49427 236 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 CNN1P51911 297 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 SPCS3P61009 180 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SIGLEC14Q08ET2 396 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 FFAR4Q5NUL3 377 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF441Q8N8Z8 693 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR2I1PQ8NGU4 316 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ROBO4Q8WZ75 1007 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 MUCL1Q96DR8 90 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SNX22Q96L94 193 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 RNF2Q99496 336 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TXN2Q99757 166 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 GPR61Q9BZJ8 451 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF331Q9NQX6 463 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 SLC7A10Q9NS82 523 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 PRR13Q9NZ81 148 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TAAR3PQ9P1P4 343 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TET1Q8NFU7 2136 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SCN5AQ14524 2016 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 LNP1A1A4G5 178 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TGFBR3LH3BV60 316 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 J3QW42 95 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 LMX1BO60663 402 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 KBTBD11O94819 623 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CFIP05156 583 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 IAPPP10997 89 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CD99P14209 185 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 B4GALT1P15291 398 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 S100A7P31151 101 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 PPP1CCP36873 323 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 CEACAM6P40199 344 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CXCL12P48061 93 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 RHOBP62745 196 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF92Q03936 586 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF154Q13106 437 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 DCAF12Q5T6F0 453 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ABLIM2Q6H8Q1 611 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF774Q6NX45 483 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CYP2G1PQ6ZSU1 146 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 SLC22A18ASQ8N1D0 253 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 PRR18Q8N4B5 295 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 BEND2Q8NDZ0 799 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR10AD1Q8NGE0 317 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 LYPD6BQ8NI32 183 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 CMTM2Q8TAZ6 248 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 MRPL30Q8TCC3 161 aaKnown RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 FAM216AQ8WUB2 273 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 ZNF501Q96CX3 271 aaPredicted RBP3.07□□□□□ -1.92
VMP1-216ENST00000592790 WBP1Q96G27 269 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 RASL10BQ96S79 203 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 OR2H1Q9GZK4 316 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 PRDM14Q9GZV8 571 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 TCFL5Q9UL49 500 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 DENND4CQ5VZ89 1909 aa3.07□□□□□ -1.92
VMP1-216ENST00000592790 PDE4DIPQ5VU43 2346 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 IGHV1OR15-9A0A0B4J2B8 117 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 TNFSF11O14788 317 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 WDR1O75083 606 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 CELA2BP08218 269 aaPredicted RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 TRGC1P0CF51 173 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 GLI4P10075 376 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 LIFP15018 202 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 OTX2P32243 289 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 WNT5AP41221 380 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 GABRA4P48169 554 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 RRADP55042 308 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 SUPT4H1P63272 117 aaKnown RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 TMEM267Q0VDI3 215 aaPredicted RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 MST1LQ2TV78 715 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 ACER2Q5QJU3 275 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 ASPHD2Q6ICH7 369 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 Q6ZS49 121 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 C1orf174Q8IYL3 243 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 CLDND2Q8NHS1 167 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 ABHD5Q8WTS1 349 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 HPSE2Q8WWQ2 592 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 RLN3Q8WXF3 142 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 IMMP2LQ96T52 175 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 PARD6GQ9BYG4 376 aaPredicted RBP3.06□□□□□ -1.92
VMP1-216ENST00000592790 PKIBQ9C010 78 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 PARD6AQ9NPB6 346 aa3.06□□□□□ -1.92
VMP1-216ENST00000592790 TUBG2Q9NRH3 451 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms