RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 C12orf77C9JDV5 145 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 HSD17B6O14756 317 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 FAM106CPP0CH98 169 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 MYF6P23409 242 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 RAB7AP51149 207 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 GPR50Q13585 617 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 RBM48Q5RL73 367 aaKnown RBP11.05□□□□□ -0.64
APOC1-208ENST00000592535 SYT6Q5T7P8 510 aaPredicted RBP11.05□□□□□ -0.64
APOC1-208ENST00000592535 NDUFA11Q86Y39 141 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 THNSL2Q86YJ6 484 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 OR8H3Q8N146 312 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 OR5AU1Q8NGC0 362 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 ANKRD60Q9BZ19 345 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 DUSP21Q9H596 190 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 MOB4Q9Y3A3 225 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 TPRKBQ9Y3C4 175 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 NOTCH1P46531 2555 aa11.05□□□□□ -0.64
APOC1-208ENST00000592535 UBE2QL1A1L167 161 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 M0QZK8 103 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 SLC31A2O15432 143 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 SC5DO75845 299 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 MPIG6BO95866 241 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 IGKV1D-33P01593 117 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 IGKV1-33P01594 117 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 TMEM11P17152 192 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 FUT3P21217 361 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 REG1BP48304 166 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 EMX1Q04741 257 aaPredicted RBP11.04□□□□□ -0.64
APOC1-208ENST00000592535 ZNF816Q0VGE8 651 aaPredicted RBP11.04□□□□□ -0.64
APOC1-208ENST00000592535 HES1Q14469 280 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 C9orf152Q5JTZ5 239 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 C1orf100Q5SVJ3 147 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 LIPKQ5VXJ0 399 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 OR10K2Q6IF99 312 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 CEACAM19Q7Z692 300 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 CENPVQ7Z7K6 275 aaPredicted RBP11.04□□□□□ -0.64
APOC1-208ENST00000592535 GAPTQ8N292 157 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 LINC00311Q8N616 119 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 OR1L1Q8NH94 360 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 PHYHIPQ92561 330 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 UFD1Q92890 307 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 CST11Q9H112 138 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 GHRLQ9UBU3 117 aa11.04□□□□□ -0.64
APOC1-208ENST00000592535 IGHV1-3A0A0C4DH29 117 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 G3V4G9 280 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 CCRL2O00421 344 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 RGS10O43665 173 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 PDCD6O75340 191 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 HBZP02008 142 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 GAPDHP04406 335 aaKnown RBP11.03□□□□□ -0.64
APOC1-208ENST00000592535 VSIG8P0DPA2 414 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 RCC1P18754 421 aaPredicted RBP11.03□□□□□ -0.64
APOC1-208ENST00000592535 SRMP19623 302 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 CD83Q01151 205 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 HNF4GQ14541 408 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 HSD17B12Q53GQ0 312 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 TCTEX1D4Q5JR98 221 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 C6orf183Q5T699 404 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 GLT8D1Q68CQ7 371 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 C10orf99Q6UWK7 81 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 MOB3BQ86TA1 216 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 PRR18Q8N4B5 295 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 C8orf31Q8N9H6 132 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 ZNF439Q8NDP4 499 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 OR10V1Q8NGI7 309 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 TMEM203Q969S6 136 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 R3HDM4Q96D70 268 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 KCNK15Q9H427 330 aa11.03□□□□□ -0.64
APOC1-208ENST00000592535 IGHV3-72A0A0B4J1Y9 119 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 A0A1W2PRX2 142 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 SPINT2O43291 252 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 CA11O75493 328 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 GLAP06280 429 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 UCHL1P09936 223 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 UBBP0CG47 229 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 HSMCR30P0CW71 290 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 CRHBPP24387 322 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 RPS25P62851 125 aaKnown RBP11.02□□□□□ -0.65
APOC1-208ENST00000592535 TPBGQ13641 420 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 Q3ZCU0 254 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 NKAPLQ5M9Q1 402 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 TRAT1Q6PIZ9 186 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 C5orf24Q7Z6I8 188 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 C5orf56Q8N8D9 126 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 MRPL30Q8TCC3 161 aaKnown RBP11.02□□□□□ -0.65
APOC1-208ENST00000592535 ST6GALNAC6Q969X2 333 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 OR4F4Q96R69 305 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 CCDC90BQ9GZT6 254 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 TAF9BQ9HBM6 251 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 RAB9BQ9NP90 201 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 GNG12Q9UBI6 72 aa11.02□□□□□ -0.65
APOC1-208ENST00000592535 SLC22A1O15245 554 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 CD37P11049 281 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 IL3RAP26951 378 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 CHATP28329 748 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 HTR2CP28335 458 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 MAP2K4P45985 399 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 ZNF134P52741 427 aa11.01□□□□□ -0.65
APOC1-208ENST00000592535 RPS27AP62979 156 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms