RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 A0A1W2PPE3 182 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 TMEM14DPA8MWL7 114 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 OOSP1A8MZH6 123 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 NPIPB11E5RHQ5 1161 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 PEX14O75381 377 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 HBZP02008 142 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 IGHV3-43DP0DP04 118 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 CHATP28329 748 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 RELBQ01201 579 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 UNC119Q13432 240 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 MADCAM1Q13477 382 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 SIGIRRQ6IA17 410 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 Q6ZSV7 163 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 C6orf201Q7Z4U5 140 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 TMEM219Q86XT9 240 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 OR56B1Q8NGI3 324 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 OR52M1Q8NGK5 317 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 OR2T6Q8NHC8 308 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 AKR1E2Q96JD6 320 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 NICN1Q9BSH3 213 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 TM2D1Q9BX74 207 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 LINC00574Q9H8X3 128 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 TAF9BQ9HBM6 251 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 ABRACLQ9P1F3 81 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 RAB22AQ9UL26 194 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 TCF19Q9Y242 345 aa8.13□□□□□ -1.11
BRCA1-227ENST00000591849 MGAM2Q2M2H8 2515 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 A0A087X0M5 115 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 LOC100506127A0A0U1RQW1 187 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 A0A1B0GX30 115 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 A6NDX4 124 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 IFITM5A6NNB3 132 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 C12orf77C9JDV5 145 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 SOCS1O15524 211 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 TSPAN9O75954 239 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 TNFAIP8O95379 198 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 IGLV1-47P01700 117 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 LPLP06858 475 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 FAM106CPP0CH98 169 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 CD37P11049 281 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 JUNBP17275 347 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-227ENST00000591849 RCC1P18754 421 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-227ENST00000591849 VEGFCP49767 419 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 DYNLT3P51808 116 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 OR10A3P58181 314 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 HES1Q14469 280 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 TMEM30BQ3MIR4 351 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 LDLRAD2Q5SZI1 272 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 CD200R1LQ6Q8B3 271 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 Q6ZTK2 550 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 MOB3BQ86TA1 216 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 TSPAN14Q8NG11 270 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 OR10V1Q8NGI7 309 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 OR1L1Q8NH94 360 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 SGMS2Q8NHU3 365 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 LINC01006Q8NI28 216 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 PIFOQ8TCI5 191 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 KCTD7Q96MP8 289 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 GFI1Q99684 422 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 SULT4A1Q9BR01 284 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 CHCHD6Q9BRQ6 235 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 PRSS22Q9GZN4 317 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 RIMS4Q9H426 269 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-227ENST00000591849 C16orf95Q9H693 158 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 OR2S2Q9NQN1 319 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 TXNL4BQ9NX01 149 aaKnown RBP8.12□□□□□ -1.11
BRCA1-227ENST00000591849 GFOD1Q9NXC2 390 aa8.12□□□□□ -1.11
BRCA1-227ENST00000591849 KIAA2026Q5HYC2 2103 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 TMEM272A0A1B0GTI8 110 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 SMIM30A4D0T7 59 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 METTL21EPA6NDL7 271 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 C15orf65H3BRN8 121 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 RGS11O94810 467 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 GAPDHP04406 335 aaKnown RBP8.11□□□□□ -1.11
BRCA1-227ENST00000591849 CD36P16671 472 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 GADD45AP24522 165 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 CD24P25063 80 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 FGF9P31371 208 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-227ENST00000591849 RAB7AP51149 207 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 QRFPP83859 136 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 ZNF554Q86TJ5 538 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 TPRA1Q86W33 373 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 MRPL30Q8TCC3 161 aaKnown RBP8.11□□□□□ -1.11
BRCA1-227ENST00000591849 GALMQ96C23 342 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 LPAR5Q9H1C0 372 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 OR51E2Q9H255 320 aa8.11□□□□□ -1.11
BRCA1-227ENST00000591849 RANBP3Q9H6Z4 567 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-227ENST00000591849 A0A075B6Q4 140 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 NOTOA8MTQ0 251 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 HSD17B6O14756 317 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 CHST1O43916 411 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 CD3GP09693 182 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 KIR2DS4P43632 304 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 REG1BP48304 166 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 MXD1Q05195 221 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 TIMM50Q3ZCQ8 353 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 C9orf152Q5JTZ5 239 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 UTF1Q5T230 341 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 C11orf88Q6PI97 169 aa8.1□□□□□ -1.11
BRCA1-227ENST00000591849 CCBE1Q6UXH8 406 aaPredicted RBP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms