RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TRAV24A0A0B4J272 114 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 IGKV1-9A0A0C4DH69 117 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 KIR2DL5BA0A0G2JN68 375 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 KIR2DL5BA0A0G2JPC4 375 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 C2orf70A6NJV1 201 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 DHRS7CA6NNS2 312 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 C11orf94C9JXX5 98 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 LOC110117498-PIK3R3F6TDL0 507 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 C15orf65H3BRN8 121 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 BMPR1BO00238 502 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 SDCBPO00560 298 aaPredicted RBP4.72□□□□□ -1.65
DNMT1-222ENST00000590619 HSPB6O14558 160 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 TXNL1O43396 289 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 ZNF254O75437 659 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 E2F6O75461 281 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 KDM4BO94953 1096 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 CYB5AP00167 134 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 P0DMU3 169 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 FAM231AP0DMU4 169 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 FAM231CP0DMU5 169 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 IGHV3-43DP0DP04 118 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 FCGR2BP31994 310 aaPredicted RBP4.72□□□□□ -1.65
DNMT1-222ENST00000590619 RBP2P50120 134 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 ATP1B3P54709 279 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 MTCP1P56278 107 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 DEFA5Q01523 94 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 ROM1Q03395 351 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 SF3A3Q12874 501 aaKnown RBP eCLIP4.72□□□□□ -1.65
DNMT1-222ENST00000590619 SOHLH1Q5JUK2 328 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 PVRIGQ6DKI7 326 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 RPL13AP3Q6NVV1 102 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 ZNF562Q6V9R5 426 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 RASSF6Q6ZTQ3 369 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 TMEM61Q8N0U2 210 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 KIR2DL5AQ8N109 375 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 KIR2DL5BQ8NHK3 375 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 DYNLRB2Q8TF09 96 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 ABHD5Q8WTS1 349 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 SNAPC3Q92966 411 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 CMC2Q9NRP2 79 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 INTS9Q9NV88 658 aaKnown RBP4.72□□□□□ -1.65
DNMT1-222ENST00000590619 LAMP5Q9UJQ1 280 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 BAIAP2Q9UQB8 552 aa4.72□□□□□ -1.65
DNMT1-222ENST00000590619 RIIAD1A6NNX1 92 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 H0YJX3 145 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 J3QL48 77 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 RRHO14718 337 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 GSTA4O15217 222 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 MAGEB4O15481 346 aaPredicted RBP4.71□□□□□ -1.66
DNMT1-222ENST00000590619 LANCL1O43813 399 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 RBMXL2O75526 392 aaKnown RBP4.71□□□□□ -1.66
DNMT1-222ENST00000590619 SCAF4O95104 1147 aaKnown RBP4.71□□□□□ -1.66
DNMT1-222ENST00000590619 SERPINA3P01011 423 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 IFNGP01579 166 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 NCK1P16333 377 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 RPL35AP18077 110 aaKnown RBP4.71□□□□□ -1.66
DNMT1-222ENST00000590619 CCL1P22362 96 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 CBLN1P23435 193 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 LIPEQ05469 1076 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 SAMD4BQ5PRF9 694 aaKnown RBP4.71□□□□□ -1.66
DNMT1-222ENST00000590619 Q6ZRM9 215 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 ZNF679Q8IYX0 411 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 POC5Q8NA72 575 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 ZNF439Q8NDP4 499 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 BVESQ8NE79 360 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 DNAAF1Q8NEP3 725 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 OR2T33Q8NG76 320 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 ARL11Q969Q4 196 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 CLCC1Q96S66 551 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 MAP6D1Q9H9H5 199 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 SPAG4Q9NPE6 437 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 ARMC1Q9NVT9 282 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 FAM118AQ9NWS6 357 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 OR52A1Q9UKL2 312 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 GTF2A1LQ9UNN4 478 aa4.71□□□□□ -1.66
DNMT1-222ENST00000590619 H3BUA1 57 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 MRASO14807 208 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 GATBO75879 557 aaKnown RBP4.7□□□□□ -1.66
DNMT1-222ENST00000590619 CSTBP04080 98 aaKnown RBP4.7□□□□□ -1.66
DNMT1-222ENST00000590619 ZNF3P17036 446 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 AADACP22760 399 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 RRM2P31350 389 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 RIDAP52758 137 aaKnown RBP4.7□□□□□ -1.66
DNMT1-222ENST00000590619 HMGA2P52926 109 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 PAX5Q02548 391 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 ODF4Q2M2E3 257 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 ZNF829Q3KNS6 432 aaPredicted RBP4.7□□□□□ -1.66
DNMT1-222ENST00000590619 ANKRD55Q3KP44 614 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 Q3ZCU0 254 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 PAN3Q58A45 887 aaKnown RBP4.7□□□□□ -1.66
DNMT1-222ENST00000590619 COQ5Q5HYK3 327 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 ZNF57Q68EA5 555 aaPredicted RBP4.7□□□□□ -1.66
DNMT1-222ENST00000590619 KCTD20Q7Z5Y7 419 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 NR2C2APQ86WQ0 139 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 ZDHHC13Q8IUH4 622 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 ODF3L1Q8IXM7 274 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 TCEANCQ8N8B7 351 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 OR9Q2Q8NGE9 314 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 OR11H2Q8NH07 326 aa4.7□□□□□ -1.66
DNMT1-222ENST00000590619 CNIH3Q8TBE1 160 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms