RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 TNFRSF19Q9NS68 423 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 AK3Q9UIJ7 227 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 POMT1Q9Y6A1 747 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 MINOS1-NBL1R4GNA1 71 aa17.3■□□□□ 0.36
ATG4D-212ENST00000590096 BTBD17A6NE02 478 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 SDCBPO00560 298 aaPredicted RBP17.29■□□□□ 0.36
ATG4D-212ENST00000590096 MRPS15P82914 257 aaKnown RBP17.29■□□□□ 0.36
ATG4D-212ENST00000590096 MOGAT2Q3SYC2 334 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 PLAC9Q5JTB6 97 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 MOB1BQ7L9L4 216 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 ZNF554Q86TJ5 538 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 OR52M1Q8NGK5 317 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 OR9G1Q8NH87 305 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 SETD6Q8TBK2 473 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 MALSU1Q96EH3 234 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 MBNL3Q9NUK0 354 aaKnown RBP17.29■□□□□ 0.36
ATG4D-212ENST00000590096 ETV7Q9Y603 341 aa17.29■□□□□ 0.36
ATG4D-212ENST00000590096 RAB27BO00194 218 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 SCGNO76038 276 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 GABARAPO95166 117 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 NAPSAO96009 420 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 HBZP02008 142 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 RNASE1P07998 156 aaKnown RBP17.28■□□□□ 0.36
ATG4D-212ENST00000590096 HTR1DP28221 377 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 IER3P46695 156 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 TMEM30BQ3MIR4 351 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 SLC16A12Q6ZSM3 486 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 OR4P4Q8NGL7 312 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 FAM216AQ8WUB2 273 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 CREB3L1Q96BA8 519 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 AJUBAQ96IF1 538 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 CMSS1Q9BQ75 279 aaKnown RBP17.28■□□□□ 0.36
ATG4D-212ENST00000590096 NAA50Q9GZZ1 169 aaKnown RBP17.28■□□□□ 0.36
ATG4D-212ENST00000590096 MEGF9Q9H1U4 602 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 TAF9BQ9HBM6 251 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 C12orf4Q9NQ89 552 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 ABRACLQ9P1F3 81 aa17.28■□□□□ 0.36
ATG4D-212ENST00000590096 A0A075B6Q4 140 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 F2RL2O00254 374 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 IGHV4-59P01825 116 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 RPL5P46777 297 aaKnown RBP17.27■□□□□ 0.36
ATG4D-212ENST00000590096 ARL6IP1Q15041 203 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 HLA-DRB5Q30154 266 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 LEAP2Q969E1 77 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 PHF21AQ96BD5 680 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 RHBDL2Q9NX52 303 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 GFOD1Q9NXC2 390 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 SCOCQ9UIL1 159 aa17.27■□□□□ 0.36
ATG4D-212ENST00000590096 TRBV6-6A0A0A6YYG2 114 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 IGHV3-43A0A0B4J1X8 118 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 IGLV1-47P01700 117 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 IGHV3-7P01780 117 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 CD3GP09693 182 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 IGHV3-43DP0DP04 118 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 HIST1H1DP16402 221 aaKnown RBP17.26■□□□□ 0.35
ATG4D-212ENST00000590096 GNB3P16520 340 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 CEACAM3P40198 252 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 GNG10P50151 68 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 SSX2Q16385 188 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 LRRC75BQ2VPJ9 315 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 OR5H6Q8NGV6 325 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 OR5R1Q8NH85 324 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 OR1L1Q8NH94 360 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 SLC25A46Q96AG3 418 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 SSX3Q99909 188 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 HDHD3Q9BSH5 251 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-212ENST00000590096 C19orf24Q9BVV8 132 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 MMP28Q9H239 520 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 DPM3Q9P2X0 92 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 GNG12Q9UBI6 72 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 MGAT4AQ9UM21 535 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 PSG11Q9UQ72 335 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 AMMECR1Q9Y4X0 333 aaPredicted RBP17.26■□□□□ 0.35
ATG4D-212ENST00000590096 HILPDAQ9Y5L2 63 aa17.26■□□□□ 0.35
ATG4D-212ENST00000590096 LEUTXA8MZ59 168 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 J3QR06 171 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 PAX6P26367 422 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 ACTG1P63261 375 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 AANATQ16613 207 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 CTF1Q16619 201 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 UTF1Q5T230 341 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 OLFML2AQ68BL7 652 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 ZNF880Q6PDB4 577 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 C16orf87Q6PH81 154 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.25■□□□□ 0.35
ATG4D-212ENST00000590096 CHIAQ9BZP6 476 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 ABCB10Q9NRK6 738 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 SPATA2Q9UM82 520 aa17.25■□□□□ 0.35
ATG4D-212ENST00000590096 POM121CA8CG34 1229 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 SERPINE3A8MV23 424 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 BUB1B-PAK6H3BSN5 160 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 MFNGO00587 321 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 LOXL3P58215 753 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 HMGN3Q15651 99 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 PLA1AQ53H76 456 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 LDLRAD2Q5SZI1 272 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 CLVS1Q8IUQ0 354 aaPredicted RBP17.24■□□□□ 0.35
ATG4D-212ENST00000590096 DYNAPQ8N1N2 210 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 OR10X1Q8NGY0 326 aa17.24■□□□□ 0.35
ATG4D-212ENST00000590096 GALMQ96C23 342 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms