RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 SOX8P57073 446 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 RPL23AP62750 156 aaKnown RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 SRSF3P84103 164 aaKnown RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 NHLH2Q02577 135 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 TSC22D1Q15714 1073 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 MIDNQ504T8 468 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 HIKESHIQ53FT3 197 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 OR2T2Q6IF00 324 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 TMEM88Q6PEY1 159 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 MDP1Q86V88 176 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 STX12Q86Y82 276 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 RDH5Q92781 318 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 AKR1E2Q96JD6 320 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 OR51I2Q9H344 312 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 C7orf69Q9H7B7 122 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 C19orf12Q9NSK7 152 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 LYRM2Q9NU23 88 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 CACFD1Q9UGQ2 172 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 PRSS50Q9UI38 385 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 FAM96BQ9Y3D0 163 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 A0A1W2PNU3 283 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 RNF212BA8MTL3 300 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 SIGLEC5O15389 551 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 ADAM20O43506 726 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 PGLYRP1O75594 196 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 DFFBO76075 338 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 IL18BPO95998 194 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 RAC2P15153 192 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 TUBG1P23258 451 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 FOXG1P55316 489 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 PPP1CBP62140 327 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 HLA-DRB3P79483 266 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 GUK1Q16774 197 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 INO80CQ6PI98 192 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 HSD17B11Q8NBQ5 300 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 DMBX1Q8NFW5 382 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 MRPL30Q8TCC3 161 aaKnown RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 ZDHHC11Q9H8X9 412 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 KCNJ16Q9NPI9 418 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 TUBG2Q9NRH3 451 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 DLL3Q9NYJ7 618 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 ERRFI1Q9UJM3 462 aaPredicted RBP6.3□□□□□ -1.4
ZNF540-206ENST00000589117 TRAPPC2LQ9UL33 140 aa6.3□□□□□ -1.4
ZNF540-206ENST00000589117 CFAP54Q96N23 3096 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF503-AS2A6NEH8 195 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 ARGFXA6NJG6 315 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 TMEM210A6NLX4 147 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 NPIPB11E5RHQ5 1161 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 SSSCA1O60232 199 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 NXPH2O95156 264 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 CD200P41217 278 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 WNT5AP41221 380 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 PPT1P50897 306 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 UCP2P55851 309 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 POLR2GP62487 172 aaKnown RBP eCLIP6.29□□□□□ -1.4
ZNF540-206ENST00000589117 TLE4Q04727 773 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 TRIP6Q15654 476 aaKnown RBP6.29□□□□□ -1.4
ZNF540-206ENST00000589117 GABRA6Q16445 453 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 C3AR1Q16581 482 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 SHEQ5VZ18 495 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 OR8G5Q8NG78 346 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 OR10V1Q8NGI7 309 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 OR10Z1Q8NGY1 313 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 OR2G3Q8NGZ4 309 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 OR8U1Q8NH10 309 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 IL1F10Q8WWZ1 152 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 RAB40CQ96S21 281 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 CCL28Q9NRJ3 127 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 KCNIP1Q9NZI2 227 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 PRELID3BQ9Y3B1 194 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 ZDBF2Q9HCK1 2354 aa6.29□□□□□ -1.4
ZNF540-206ENST00000589117 DOCK10Q96BY6 2186 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 TRAV24A0A0B4J272 114 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 IFNA5P01569 189 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 WNT2P09544 360 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 CLINT1Q14677 625 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 HERPUD1Q15011 391 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 DAZAP2Q15038 168 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 NMSQ5H8A3 153 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 AVPI1Q5T686 147 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 SLC25A24Q6NUK1 477 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 ZNF880Q6PDB4 577 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 DPPA3Q6W0C5 159 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 Q6ZPA2 131 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 C1orf174Q8IYL3 243 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 H1FOOQ8IZA3 346 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 TMEM252Q8N6L7 170 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 SUMF1Q8NBK3 374 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 LILRB1Q8NHL6 650 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 FAM213BQ8TBF2 198 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 CABLES2Q9BTV7 478 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 FGF23Q9GZV9 251 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 SLC35B3Q9H1N7 401 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 OR51B6Q9H340 312 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 LIN7CQ9NUP9 197 aaKnown RBP6.28□□□□□ -1.4
ZNF540-206ENST00000589117 TAAR3PQ9P1P4 343 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 FRYLO94915 3013 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 IGKV1D-13A0A0B4J2D9 117 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 A0A1B0GW64 132 aa6.28□□□□□ -1.4
ZNF540-206ENST00000589117 FAM24AA6NFZ4 105 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms