RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 NKX1-2Q9UD57 310 aaPredicted RBP17.37■□□□□ 0.37
CIRBP-219ENST00000588411 TPRKBQ9Y3C4 175 aa17.37■□□□□ 0.37
CIRBP-219ENST00000588411 TCRBV4S1A1TA0A5B7 111 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 H0YHG0 523 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 AQP4P55087 323 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 MED22Q15528 200 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 FBLN7Q53RD9 439 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 RBM48Q5RL73 367 aaKnown RBP17.36■□□□□ 0.37
CIRBP-219ENST00000588411 GLT8D1Q68CQ7 371 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 MOB3BQ86TA1 216 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 LYPD6Q86Y78 171 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 TMEM104Q8NE00 496 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 Q96M66 194 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 VCX3BQ9H321 246 aa17.36■□□□□ 0.37
CIRBP-219ENST00000588411 A0A1W2PRX2 142 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 SH2D7A6NKC9 451 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-219ENST00000588411 ADARB2-AS1A8MUL3 147 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 C12orf77C9JDV5 145 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 FGF16O43320 207 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 IGKV1D-33P01593 117 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 IGKV1-33P01594 117 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 PF4V1P10720 104 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 LOXL3P58215 753 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 DIAPH2-AS1Q14236 149 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 HNF4GQ14541 408 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 OR4K15Q8NH41 348 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 UBALD1Q8TB05 177 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 UFD1Q92890 307 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 FAM46BQ96A09 425 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 KCNIP1Q9NZI2 227 aa17.35■□□□□ 0.37
CIRBP-219ENST00000588411 TSSC4Q9Y5U2 329 aaPredicted RBP17.35■□□□□ 0.37
CIRBP-219ENST00000588411 IGHV3-43A0A0B4J1X8 118 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 IGHV1-3A0A0C4DH29 117 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 G3V4G9 280 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 PDCD6O75340 191 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 SC5DO75845 299 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 IGHV3-43DP0DP04 118 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 HSD17B12Q53GQ0 312 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 SAMD5Q5TGI4 173 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 UNQ9370/PRO34162Q6UXP9 181 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 GAPTQ8N292 157 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 PRR18Q8N4B5 295 aa17.34■□□□□ 0.37
CIRBP-219ENST00000588411 LSM2Q9Y333 95 aaKnown RBP17.34■□□□□ 0.37
CIRBP-219ENST00000588411 TXNL1O43396 289 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 MPIG6BO95866 241 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 REG1BP48304 166 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 SLC35A2P78381 396 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 BEAN1Q3B7T3 259 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 KHDC1LQ5JSQ8 128 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 CEACAM19Q7Z692 300 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 ZNF554Q86TJ5 538 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 IZUMO1Q8IYV9 350 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 C5orf56Q8N8D9 126 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 NEDD4LQ96PU5 975 aa17.33■□□□□ 0.36
CIRBP-219ENST00000588411 UBE2QL1A1L167 161 aa17.32■□□□□ 0.36
CIRBP-219ENST00000588411 PSMB11A5LHX3 300 aa17.32■□□□□ 0.36
CIRBP-219ENST00000588411 HBZP02008 142 aa17.32■□□□□ 0.36
CIRBP-219ENST00000588411 INSL4Q14641 139 aa17.32■□□□□ 0.36
CIRBP-219ENST00000588411 NKAPLQ5M9Q1 402 aa17.32■□□□□ 0.36
CIRBP-219ENST00000588411 KPRPQ5T749 579 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-219ENST00000588411 FAM27D1Q5T7N8 215 aa17.32■□□□□ 0.36
CIRBP-219ENST00000588411 OR2T10Q8NGZ9 312 aa17.32■□□□□ 0.36
CIRBP-219ENST00000588411 NRG4Q8WWG1 115 aa17.32■□□□□ 0.36
CIRBP-219ENST00000588411 RGS10O43665 173 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 PF4P02776 101 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 SRMP19623 302 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 MYF6P23409 242 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 VHLP40337 213 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 EBI3Q14213 229 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 IRF3Q14653 427 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 TRAM1Q15629 374 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 C1orf100Q5SVJ3 147 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 LIPKQ5VXJ0 399 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 STEAP3Q658P3 488 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 SIGIRRQ6IA17 410 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 SLC25A48Q6ZT89 311 aaKnown RBP17.31■□□□□ 0.36
CIRBP-219ENST00000588411 REC114Q7Z4M0 266 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 LRRTM1Q86UE6 522 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 OR10V1Q8NGI7 309 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 OR1L1Q8NH94 360 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 KCNG3Q8TAE7 436 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 CHPT1Q8WUD6 406 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 RTN4IP1Q8WWV3 396 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-219ENST00000588411 TMEM59Q9BXS4 323 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 TAF9BQ9HBM6 251 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 OR2S2Q9NQN1 319 aa17.31■□□□□ 0.36
CIRBP-219ENST00000588411 IGHV3-72A0A0B4J1Y9 119 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 NCBP2LA6PVI3 153 aaKnown RBP17.3■□□□□ 0.36
CIRBP-219ENST00000588411 SERPINE3A8MV23 424 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 UCHL1P09936 223 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 HSMCR30P0CW71 290 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 RCC1P18754 421 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-219ENST00000588411 CD33P20138 364 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 PSMA1P25786 263 aaKnown RBP17.3■□□□□ 0.36
CIRBP-219ENST00000588411 HTR2CP28335 458 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 HSPA13P48723 471 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 TCTEX1D4Q5JR98 221 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 SLC35E3Q7Z769 313 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 TGIF2LXQ8IUE1 241 aa17.3■□□□□ 0.36
CIRBP-219ENST00000588411 FOXRED2Q8IWF2 684 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms