RNA–Protein interactions for RNA: ENST00000588109.5

LIG3-210, Transcript of DNA ligase 3, humanhuman

TSL 4

Gene LIG3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-210ENST00000588109 MELTFP08582 738 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 FCGR3AP08637 254 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 WNT2P09544 360 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 GSTT2BP0CG30 244 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 SLC25A16P16260 332 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 DTYMKP23919 212 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 RCVRNP35243 200 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 GLP1RP43220 463 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 GLIPR1P48060 266 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 NPY4RP50391 375 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 AP3S2P59780 193 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 ARPC4P59998 168 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 RPL31P62899 125 aaKnown RBP4.39□□□□□ -1.71
LIG3-210ENST00000588109 CHRFAM7AQ494W8 412 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 C6orf183Q5T699 404 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 RSBN1Q5VWQ0 802 aaPredicted RBP4.39□□□□□ -1.71
LIG3-210ENST00000588109 ZNF57Q68EA5 555 aaPredicted RBP4.39□□□□□ -1.71
LIG3-210ENST00000588109 SLC35E4Q6ICL7 350 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 ZNF497Q6ZNH5 498 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 MOB1BQ7L9L4 216 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 FAM185AQ8N0U4 392 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 BCL6BQ8N143 479 aaPredicted RBP4.39□□□□□ -1.71
LIG3-210ENST00000588109 FGFRL1Q8N441 504 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 PRR18Q8N4B5 295 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 ZNF565Q8N9K5 539 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 ZBTB34Q8NCN2 500 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 CLDND2Q8NHS1 167 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 MRPL30Q8TCC3 161 aaKnown RBP4.39□□□□□ -1.71
LIG3-210ENST00000588109 MRGPRDQ8TDS7 321 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 GPX8Q8TED1 209 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 MAFIPQ8WZ33 124 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 BORCS5Q969J3 196 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 COQ2Q96H96 371 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 CYYR1Q96J86 154 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 Q96MF0 132 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 SOSTQ9BQB4 213 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 SSBP3Q9BWW4 388 aaPredicted RBP4.39□□□□□ -1.71
LIG3-210ENST00000588109 PATZ1Q9HBE1 687 aaKnown RBP4.39□□□□□ -1.71
LIG3-210ENST00000588109 ZNF286AQ9HBT8 521 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 TAS2R8Q9NYW2 309 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 OR6C3Q9NZP0 311 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 LPAR3Q9UBY5 353 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 KIF25Q9UIL4 384 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 ITGB1BP2Q9UKP3 347 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 DCHS2Q6V1P9 2916 aa4.39□□□□□ -1.71
LIG3-210ENST00000588109 PTPN13Q12923 2485 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 LOC105371242A0A075B767 164 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 NBPF19A0A087WUL8 3843 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 IGHV4-61A0A0C4DH41 118 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 KIR2DS1A0A191URI9 304 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 A0A1W2PPH5 198 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 CENPXA8MT69 81 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 KRTAP9-7A8MTY7 169 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 VWC2LB2RUY7 222 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 ZNF736B4DX44 427 aaPredicted RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 TRDCB7Z8K6 153 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 F5H0A9 414 aaPredicted RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 PHF1O43189 567 aaPredicted RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 SPINT2O43291 252 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 ORC5O43913 435 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 FOXH1O75593 365 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 UPK1BO75841 260 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 ECDO95905 644 aaPredicted RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 NAPSAO96009 420 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 IGHV2-5P01817 119 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 CSF1P09603 554 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 IL7P13232 177 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 RCC1P18754 421 aaPredicted RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 USF1P22415 310 aaPredicted RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 HLA-DMAP28067 261 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 ERP29P30040 261 aaKnown RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 IL2RGP31785 369 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 FAUP35544 74 aaKnown RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 KIR2DS4P43632 304 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 OR3A3P47888 321 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 TAS2R46P59540 309 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 TAS2R19P59542 299 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 DEFA1P59665 94 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 DEFA3P59666 94 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 SEC61A1P61619 476 aaKnown RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 HLA-DRB3P79483 266 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 SSBP1Q04837 148 aaKnown RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 MEF2CQ06413 473 aaPredicted RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 KIR2DS1Q14954 304 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 BAK1Q16611 211 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 ACTBL2Q562R1 376 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 WDR25Q64LD2 544 aaPredicted RBP4.38□□□□□ -1.71
LIG3-210ENST00000588109 CRYBG3Q68DQ2 2970 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 OR52W1Q6IF63 320 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 TRAT1Q6PIZ9 186 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 PRSS57Q6UWY2 283 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 DNM1P46Q6ZS02 220 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 BTN2A1Q7KYR7 527 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 HOGA1Q86XE5 327 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 TOMM5Q8N4H5 51 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 OR2C3Q8N628 320 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 GVQW1Q8N7I0 195 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 BEST4Q8NFU0 473 aa4.38□□□□□ -1.71
LIG3-210ENST00000588109 OR13A1Q8NGR1 328 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms