RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 OCMP0CE72 109 aaPredicted RBP3.3□□□□□ -1.88
TUBD1-208ENST00000588009 LIMS3P0CW19 117 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 LIMS4P0CW20 117 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF35P13682 527 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 PSMB9P28065 219 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 CD40LGP29965 261 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 CTAG1AP78358 180 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 PITPNAQ00169 270 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 MEF2CQ06413 473 aaPredicted RBP3.3□□□□□ -1.88
TUBD1-208ENST00000588009 ZNHIT3Q15649 155 aaPredicted RBP3.3□□□□□ -1.88
TUBD1-208ENST00000588009 ABCA11PQ4W5N1 156 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 KLHL12Q53G59 568 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 LAMTOR1Q6IAA8 161 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 TPGS1Q6ZTW0 290 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 DYNC2LI1Q8TCX1 351 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 STARD4Q96DR4 205 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 PGLYRP3Q96LB9 341 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 LINC00167Q96N53 147 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 DERL3Q96Q80 235 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 C7orf50Q9BRJ6 194 aaKnown RBP3.3□□□□□ -1.88
TUBD1-208ENST00000588009 SUCNR1Q9BXA5 334 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 MS4A8Q9BY19 250 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 KRTAP4-4Q9BYR3 166 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 API5Q9BZZ5 524 aaKnown RBP3.3□□□□□ -1.88
TUBD1-208ENST00000588009 ZSCAN16Q9H4T2 348 aaPredicted RBP3.3□□□□□ -1.88
TUBD1-208ENST00000588009 POMKQ9H5K3 350 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 RBM12B-AS1Q9P1G2 102 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 FBXL3Q9UKT7 428 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 MYO15AQ9UKN7 3530 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 FER1L6Q2WGJ9 1857 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 CREBBPQ92793 2442 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 TJP1Q07157 1748 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 E9PCH4 1651 aa3.3□□□□□ -1.88
TUBD1-208ENST00000588009 COL1A1P02452 1464 aaPredicted RBP3.29□□□□□ -1.88
TUBD1-208ENST00000588009 VPS13AQ96RL7 3174 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 PPIP5K1Q6PFW1 1433 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 A0A1W2PRG6 482 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 PGPA6NDG6 321 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF850A8MQ14 1090 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 J3QLI3 93 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 ITGB1BP1O14713 200 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 FFAR1O14842 300 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 TOX3O15405 576 aaPredicted RBP3.29□□□□□ -1.88
TUBD1-208ENST00000588009 MAGEB4O15481 346 aaPredicted RBP3.29□□□□□ -1.88
TUBD1-208ENST00000588009 CD28P10747 220 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 MYL6P60660 151 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 UBE2IP63279 158 aaKnown RBP3.29□□□□□ -1.88
TUBD1-208ENST00000588009 HBG1P69891 147 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 HBG2P69892 147 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 EBI3Q14213 229 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 ELOCQ15369 112 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 SSX1Q16384 188 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 STK40Q8N2I9 435 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 SLC35G3Q8N808 338 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 SPANXA2-OT1Q8N9U9 137 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 ATP6V1C2Q8NEY4 427 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 PPWD1Q96BP3 646 aaKnown RBP3.29□□□□□ -1.88
TUBD1-208ENST00000588009 YIPF6Q96EC8 236 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 APOL4Q9BPW4 351 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 TAPBPLQ9BX59 468 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 TSGA10Q9BZW7 698 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 WDR54Q9H977 334 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 RDH14Q9HBH5 336 aa3.29□□□□□ -1.88
TUBD1-208ENST00000588009 ARID1AO14497 2285 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 ANKRD36BQ8N2N9 1353 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 LRRC37A2A6NM11 1700 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 RAD50Q92878 1312 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 C7orf66A4D0T2 115 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 FABP12A6NFH5 140 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 C9J4A7 227 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 C9JQL5 133 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 MPZL2O60487 215 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 RAB36O95755 333 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 SEC11BP0C7V7 166 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 CECR9P0C854 216 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 SLC2A1P11166 492 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 NTF3P20783 257 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 RHOAP61586 193 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 ATP5G2Q06055 141 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 PRDX1Q06830 199 aaKnown RBP3.28□□□□□ -1.88
TUBD1-208ENST00000588009 BTN1A1Q13410 526 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 SP6Q3SY56 376 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 COX19Q49B96 90 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 UBE2NLQ5JXB2 153 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 TIMM23BQ5SRD1 257 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 NIPAL1Q6NVV3 410 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 UNQ9165/PRO28630Q6UXU0 137 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 GALNT10Q86SR1 603 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 LINC00596Q86U02 117 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 C10orf107Q8IVU9 208 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF555Q8NEP9 628 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 OR52N1Q8NH53 320 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 DDIT4LQ96D03 193 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 WDR34Q96EX3 536 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 SLC25A31Q9H0C2 315 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 ING2Q9H160 280 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 PSMD13Q9UNM6 376 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 ZNF780BQ9Y6R6 833 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 TICRRQ7Z2Z1 1910 aa3.28□□□□□ -1.88
TUBD1-208ENST00000588009 CEP295Q9C0D2 2601 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms