RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 S100A13Q99584 98 aa11.91□□□□□ -0.5
PRKCSH-204ENST00000587290 GPR61Q9BZJ8 451 aa11.91□□□□□ -0.5
PRKCSH-204ENST00000587290 S100A14Q9HCY8 104 aa11.91□□□□□ -0.5
PRKCSH-204ENST00000587290 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.91□□□□□ -0.5
PRKCSH-204ENST00000587290 LIN7CQ9NUP9 197 aaKnown RBP11.91□□□□□ -0.5
PRKCSH-204ENST00000587290 SLC2A2P11168 524 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 IGFBP3P17936 291 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 GZMHP20718 246 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 MYF6P23409 242 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 ZNF134P52741 427 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 GPR50Q13585 617 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 DOC2BQ14184 412 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 GNMTQ14749 295 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 MPV17LQ2QL34 196 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 CCDC58Q4VC31 144 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 SYT6Q5T7P8 510 aaPredicted RBP11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 TEX38Q6PEX7 206 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 LINC00311Q8N616 119 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 COMMD1Q8N668 190 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 ZNF439Q8NDP4 499 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 GHSRQ92847 366 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 S1PR3Q99500 378 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 MCRIP2Q9BUT9 160 aaKnown RBP11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 BANF2Q9H503 90 aa11.9□□□□□ -0.5
PRKCSH-204ENST00000587290 HUWE1Q7Z6Z7 4374 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 TRBV5-5A0A0J9YX44 114 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 OGG1O15527 345 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 MOSP00540 346 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 HBZP02008 142 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 GTF2F2P13984 249 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 RPS11P62280 158 aaKnown RBP eCLIP11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 ADARB1P78563 741 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 DGCR2P98153 550 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 PNLIPRP3Q17RR3 467 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 CT45A1Q5HYN5 189 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 CXorf66Q5JRM2 361 aaPredicted RBP11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 JAGN1Q8N5M9 183 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 OR52M1Q8NGK5 317 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 CT45A3Q8NHU0 189 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 OR14A2Q96R54 314 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 ETAA1Q9NY74 926 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 RCC2Q9P258 522 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 GNG12Q9UBI6 72 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 TRAPPC2LQ9UL33 140 aa11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 MRPS28Q9Y2Q9 187 aaKnown RBP11.89□□□□□ -0.51
PRKCSH-204ENST00000587290 ORC5O43913 435 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 BAG2O95816 211 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 IL3RAP26951 378 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 DCKP27707 260 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 CD1BP29016 333 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 SLC6A1P30531 599 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 CFHR3Q02985 330 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 DMKNQ6E0U4 476 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 RAB12Q6IQ22 244 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 GLIPR1L1Q6UWM5 242 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 UNQ9370/PRO34162Q6UXP9 181 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 TMPRSS11AQ6ZMR5 421 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 SLC25A48Q6ZT89 311 aaKnown RBP11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 LINC00596Q86U02 117 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 FAM71E2Q8N5Q1 922 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 PGLYRP3Q96LB9 341 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 WWC2-AS2Q96NR7 200 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 RASL11BQ9BPW5 248 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 PAK1IP1Q9NWT1 392 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 BABAM2Q9NXR7 383 aa11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 SMPD3Q9NY59 655 aaPredicted RBP11.88□□□□□ -0.51
PRKCSH-204ENST00000587290 SORL1Q92673 2214 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 UBE2QL1A1L167 161 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 MAS1P04201 325 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 MYL12AP19105 171 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 CNTFRP26992 372 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 FOXE3Q13461 319 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 LRRC36Q1X8D7 754 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 NKAPLQ5M9Q1 402 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 AWAT2Q6E213 333 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 STX19Q8N4C7 294 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 C8orf31Q8N9H6 132 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 ZNF555Q8NEP9 628 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 OR8U1Q8NH10 309 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 RITA1Q96K30 269 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 ASCL2Q99929 193 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 SELENOIQ9C0D9 397 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 DIMT1Q9UNQ2 313 aaKnown RBP11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 PEX16Q9Y5Y5 336 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 WSB1Q9Y6I7 421 aa11.87□□□□□ -0.51
PRKCSH-204ENST00000587290 TRBV5-7A0A0A0MS05 114 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 SEC14L6B5MCN3 397 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 MCRIP1C9JLW8 97 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 SPINT2O43291 252 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 VDAC1P21796 283 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 SOX6P35712 828 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 ECI1P42126 302 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 ZNF137PP52743 207 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 LSAMPQ13449 338 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 KIR2DS1Q14954 304 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 Q499Y3 187 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 SIGIRRQ6IA17 410 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 RNF152Q8N8N0 203 aa11.86□□□□□ -0.51
PRKCSH-204ENST00000587290 ZNF485Q8NCK3 441 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms