RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 WSB1Q9Y6I7 421 aa9.2□□□□□ -0.94
BRCA1-225ENST00000586385 A0A1W2PP11 408 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 C12orf77C9JDV5 145 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 ATP6V0E1O15342 81 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 ORC5O43913 435 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 OR7C1O76099 320 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-225ENST00000586385 HTR3BO95264 441 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 MT-ND4P03905 459 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 OR8U8P0C7N1 319 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 CNTFRP26992 372 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 SNRPGP62308 76 aaKnown RBP9.19□□□□□ -0.94
BRCA1-225ENST00000586385 ZNF616Q08AN1 781 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 LSAMPQ13449 338 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 GALEQ14376 348 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 RSU1Q15404 277 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 C19orf54Q5BKX5 351 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 ZNF497Q6ZNH5 498 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 C5orf24Q7Z6I8 188 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 SATL1Q86VE3 508 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 DLX4Q92988 240 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-225ENST00000586385 ALG8Q9BVK2 526 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 EDA2RQ9HAV5 297 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 TPSG1Q9NRR2 321 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 IL36GQ9NZH8 169 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 ZNF107Q9UII5 783 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-225ENST00000586385 ST3GAL6Q9Y274 331 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 VSIG4Q9Y279 399 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 AP4S1Q9Y587 144 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 CSMD3Q7Z407 3707 aa9.19□□□□□ -0.94
BRCA1-225ENST00000586385 IGHV7-81A0A0B4J1V7 117 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 MAGEA13PA6NCF6 341 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 SAC3D1A6NKF1 404 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 TMEM212A6NML5 194 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 OVOL1O14753 267 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 SOX15O60248 233 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 GABRB1P18505 474 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 RAB3AP20336 220 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 MYF6P23409 242 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 SOX2P48431 317 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 GTF2A1P52655 376 aaPredicted RBP9.18□□□□□ -0.94
BRCA1-225ENST00000586385 SLURP1P55000 103 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 NDPQ00604 133 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 XAF1Q6GPH4 301 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 ZNF429Q86V71 674 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 SYS1Q8N2H4 156 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 MINDY2Q8NBR6 621 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 OR52N1Q8NH53 320 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 TRUB1Q8WWH5 349 aaKnown RBP9.18□□□□□ -0.94
BRCA1-225ENST00000586385 TM2D3Q9BRN9 247 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 JAM3Q9BX67 310 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 FAM192AQ9GZU8 254 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 FAM118AQ9NWS6 357 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 DHDHQ9UQ10 334 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 FBXO7Q9Y3I1 522 aa9.18□□□□□ -0.94
BRCA1-225ENST00000586385 ALPLP05186 524 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 GP9P14770 177 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 IL3RAP26951 378 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 RAB9AP51151 201 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 Q3ZCU0 254 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 FAM27D1Q5T7N8 215 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 ODF3L1Q8IXM7 274 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 OR10V1Q8NGI7 309 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 OR5AK2Q8NH90 309 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 OR1L1Q8NH94 360 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 TSEN15Q8WW01 171 aaKnown RBP9.17□□□□□ -0.94
BRCA1-225ENST00000586385 ORAI1Q96D31 301 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 CENPNQ96H22 339 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-225ENST00000586385 GPER1Q99527 375 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 OR51J1Q9H342 316 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 IMPAD1Q9NX62 359 aa9.17□□□□□ -0.94
BRCA1-225ENST00000586385 RCC2Q9P258 522 aaKnown RBP9.17□□□□□ -0.94
BRCA1-225ENST00000586385 AIPO00170 330 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 LANCL1O43813 399 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 SAP30O75446 220 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 HLA-DRB1P01911 266 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 OR5H8P0DN80 308 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 SNRPBP14678 240 aaKnown RBP9.16□□□□□ -0.94
BRCA1-225ENST00000586385 BLVRBP30043 206 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-225ENST00000586385 ACTBP60709 375 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 ADARB1P78563 741 aaKnown RBP9.16□□□□□ -0.94
BRCA1-225ENST00000586385 GNMTQ14749 295 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 MMDQ15546 238 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 ACSM6Q6P461 480 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 ADAMTSL5Q6ZMM2 481 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 HAPLN4Q86UW8 402 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 Q8N1Y9 231 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 GAPTQ8N292 157 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 CASTOR1Q8WTX7 329 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 ARPC1AQ92747 370 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 CHCHD6Q9BRQ6 235 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 MRPL20Q9BYC9 149 aaKnown RBP9.16□□□□□ -0.94
BRCA1-225ENST00000586385 ANKRD60Q9BZ19 345 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 TOLLIPQ9H0E2 274 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 AMBNQ9NP70 447 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 ERVK13-1Q9NX77 482 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 ING4Q9UNL4 249 aa9.16□□□□□ -0.94
BRCA1-225ENST00000586385 IGHV4OR15-8A0A075B7B6 117 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 A0A087WW49 117 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 TRAV41A0A0B4J266 112 aa9.15□□□□□ -0.94
BRCA1-225ENST00000586385 TXNL1O43396 289 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms