RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RAB39BQ96DA2 213 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 KIRREL1Q96J84 757 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 WDR13Q9H1Z4 485 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 ELF5Q9UKW6 265 aaPredicted RBP10.51□□□□□ -0.73
VMP1-202ENST00000585847 TRAPPC2LQ9UL33 140 aa10.51□□□□□ -0.73
VMP1-202ENST00000585847 TRBV23-1A0A0A0MS06 115 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 IGHV4-61A0A0C4DH41 118 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 M0QYG6 137 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 NDUFS8O00217 210 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 SPINT2O43291 252 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 SLC22A5O76082 557 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 GPR6P46095 362 aaPredicted RBP10.5□□□□□ -0.73
VMP1-202ENST00000585847 DSCR9P59020 149 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 HERV-K104P61576 105 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 SCGB2B2Q4G0G5 96 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 KRBOX4Q5JUW0 171 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 SFRP4Q6FHJ7 346 aaPredicted RBP10.5□□□□□ -0.73
VMP1-202ENST00000585847 C17orf107Q6ZR85 190 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 SLC38A6Q8IZM9 456 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 SPICQ8N5J4 248 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 TMEM185AQ8NFB2 350 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 OR10A7Q8NGE5 316 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 RAB1CQ92928 201 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 MOB3AQ96BX8 217 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 DMRTB1Q96MA1 342 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 SLC6A7Q99884 636 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 TOLLIPQ9H0E2 274 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 MMP28Q9H239 520 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 C14orf166Q9Y224 244 aaKnown RBP10.5□□□□□ -0.73
VMP1-202ENST00000585847 DNHD1Q96M86 4753 aa10.5□□□□□ -0.73
VMP1-202ENST00000585847 MEIKINA0A087WXM9 373 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 TRBV6-7A0A0A0MS04 114 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 A0A1W2PPH5 198 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 hADV38S2A0JD32 116 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 ODAMA1E959 279 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 ARPC1BO15143 372 aaKnown RBP10.49□□□□□ -0.73
VMP1-202ENST00000585847 PPIHO43447 177 aaKnown RBP10.49□□□□□ -0.73
VMP1-202ENST00000585847 PSPNO60542 156 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 FCN3O75636 299 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 RGS11O94810 467 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 PMP2P02689 132 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 HEXAP06865 529 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 SPNP16150 400 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 GABRA2P47869 451 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 HTD2P86397 168 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 ATXN7L3Q14CW9 347 aaPredicted RBP10.49□□□□□ -0.73
VMP1-202ENST00000585847 Q3ZCU0 254 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 LRRC10Q5BKY1 277 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 LY6G6FQ5SQ64 297 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 CD276Q5ZPR3 534 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 ZNF660Q6AZW8 331 aaPredicted RBP10.49□□□□□ -0.73
VMP1-202ENST00000585847 GLDNQ6ZMI3 551 aaPredicted RBP10.49□□□□□ -0.73
VMP1-202ENST00000585847 NLRC3Q7RTR2 1065 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 BATF2Q8N1L9 274 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 CCDC71LQ8N9Z2 235 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 OR4D10Q8NGI6 311 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 OR13C8Q8NGS7 320 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 OR10J5Q8NHC4 309 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 GALMQ96C23 342 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 HDHD3Q9BSH5 251 aaPredicted RBP10.49□□□□□ -0.73
VMP1-202ENST00000585847 PIMREGQ9BSJ6 248 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 GHITMQ9H3K2 345 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 ZNF230Q9UIE0 474 aaPredicted RBP10.49□□□□□ -0.73
VMP1-202ENST00000585847 ARHGAP32A7KAX9 2087 aa10.49□□□□□ -0.73
VMP1-202ENST00000585847 IGHV3OR15-7A0A075B7D8 119 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 TRGV10A0A0A0MS01 117 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 HMX3A6NHT5 357 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 TUSC2O75896 110 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 SNAPC5O75971 98 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 TFF1P04155 84 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 RLN1P04808 185 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 CTSDP07339 412 aaPredicted RBP10.48□□□□□ -0.73
VMP1-202ENST00000585847 ANXA3P12429 323 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 SLC25A16P16260 332 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 ZBTB25P24278 435 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 IL2RGP31785 369 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 NPY4RP50391 375 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 SRPXP78539 464 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 TMEM128Q5BJH2 165 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 SLC25A42Q86VD7 318 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 CD177Q8N6Q3 437 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 BOLLQ8N9W6 283 aaKnown RBP10.48□□□□□ -0.73
VMP1-202ENST00000585847 CLDND2Q8NHS1 167 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 PLPPR1Q8TBJ4 325 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 EDARADDQ8WWZ3 215 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 GAFA1Q96PS6 74 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 TMEM246Q9BRR3 403 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 ZNF2Q9BSG1 426 aaPredicted RBP10.48□□□□□ -0.73
VMP1-202ENST00000585847 REG4Q9BYZ8 158 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 SHARPINQ9H0F6 387 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 GAL3ST2Q9H3Q3 398 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 LINC00574Q9H8X3 128 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 TAS2R3Q9NYW6 316 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 JPT1Q9UK76 154 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 UBE2J1Q9Y385 318 aaPredicted RBP10.48□□□□□ -0.73
VMP1-202ENST00000585847 DOCK11Q5JSL3 2073 aa10.48□□□□□ -0.73
VMP1-202ENST00000585847 TRAV6A0A075B6T7 132 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 A0A0B4J2A0 478 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 FAM172BPA6NC97 362 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 RNF223E7ERA6 249 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms