RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CSF1P09603 554 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 FAM106CPP0CH98 169 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 IGHV3-43DP0DP04 118 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 VSIG8P0DPA2 414 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 VDAC2P45880 294 aaPredicted RBP16.34■□□□□ 0.21
SS18-224ENST00000584083 RAB7AP51149 207 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 NKAPLQ5M9Q1 402 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 HIST2H2BDQ6DRA6 164 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 PRR18Q8N4B5 295 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 OR56B4Q8NH76 319 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 RBM14Q96PK6 669 aaKnown RBP16.34■□□□□ 0.21
SS18-224ENST00000584083 NEDD4LQ96PU5 975 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 GFOD1Q9NXC2 390 aa16.34■□□□□ 0.21
SS18-224ENST00000584083 C12orf77C9JDV5 145 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 OR2F2O95006 317 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 DIAPH2-AS1Q14236 149 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 FBLN7Q53RD9 439 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 TRAT1Q6PIZ9 186 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 OR8H3Q8N146 312 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 DRAM1Q8N682 238 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 OR6M1Q8NGM8 313 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 KCNG3Q8TAE7 436 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 FAM110DQ8TAY7 271 aaPredicted RBP16.33■□□□□ 0.2
SS18-224ENST00000584083 CFHR4Q92496 578 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 TMEM59Q9BXS4 323 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 PLGRKTQ9HBL7 147 aa16.33■□□□□ 0.2
SS18-224ENST00000584083 VWFP04275 2813 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 A0A1W2PPI3 338 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 SLC22A1O15245 554 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 FBXO24O75426 580 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 SNRNP70P08621 437 aaKnown RBP16.32■□□□□ 0.2
SS18-224ENST00000584083 RCC1P18754 421 aaPredicted RBP16.32■□□□□ 0.2
SS18-224ENST00000584083 LOXL3P58215 753 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 FABP5Q01469 135 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 HES1Q14469 280 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 TBCEQ15813 527 aaPredicted RBP16.32■□□□□ 0.2
SS18-224ENST00000584083 TMEM95Q3KNT9 176 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 ABCA11PQ4W5N1 156 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 FAM53AQ6NSI3 398 aaPredicted RBP16.32■□□□□ 0.2
SS18-224ENST00000584083 ZNF367Q7RTV3 350 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 GAPTQ8N292 157 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 KCNK15Q9H427 330 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 KCNIP1Q9NZI2 227 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 GNG12Q9UBI6 72 aa16.32■□□□□ 0.2
SS18-224ENST00000584083 AK6Q9Y3D8 172 aaKnown RBP16.32■□□□□ 0.2
SS18-224ENST00000584083 CCRL2O00421 344 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 BPNT1O95861 308 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 HBZP02008 142 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 GAPDHP04406 335 aaKnown RBP16.31■□□□□ 0.2
SS18-224ENST00000584083 CALRP27797 417 aaKnown RBP16.31■□□□□ 0.2
SS18-224ENST00000584083 RPS27AP62979 156 aaKnown RBP16.31■□□□□ 0.2
SS18-224ENST00000584083 P2RY14Q15391 338 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 MOB3BQ86TA1 216 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 THNSL2Q86YJ6 484 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 OR1L1Q8NH94 360 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 CYYR1Q96J86 154 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 OCSTAMPQ9BR26 566 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 TAF9BQ9HBM6 251 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 ACOT13Q9NPJ3 140 aa16.31■□□□□ 0.2
SS18-224ENST00000584083 M0QZK8 103 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 HSD17B6O14756 317 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 LPLP06858 475 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 CD28P10747 220 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 CD37P11049 281 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 IL3RAP26951 378 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 CHATP28329 748 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 REG1BP48304 166 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 UNC119Q13432 240 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 HNF4GQ14541 408 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 TMEM30BQ3MIR4 351 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 C9orf152Q5JTZ5 239 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 LYG1Q8N1E2 194 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 LINC00311Q8N616 119 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 C8orf31Q8N9H6 132 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 OR10V1Q8NGI7 309 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 SULT4A1Q9BR01 284 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 FAAP24Q9BTP7 215 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 WNT10AQ9GZT5 417 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 Q9H521 79 aa16.3■□□□□ 0.2
SS18-224ENST00000584083 SH2D7A6NKC9 451 aaPredicted RBP16.29■□□□□ 0.2
SS18-224ENST00000584083 FAM90A9PA6NNJ1 464 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 TMEM14DPA8MWL7 114 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 SLC17A2O00624 439 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 ARSBP15848 533 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 TMEM11P17152 192 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 BLVRBP30043 206 aaPredicted RBP16.29■□□□□ 0.2
SS18-224ENST00000584083 QRFPP83859 136 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 ZNF816Q0VGE8 651 aaPredicted RBP16.29■□□□□ 0.2
SS18-224ENST00000584083 RAB11BQ15907 218 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 NSUN5P1Q3KNT7 163 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 C6orf201Q7Z4U5 140 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 MRPL30Q8TCC3 161 aaKnown RBP16.29■□□□□ 0.2
SS18-224ENST00000584083 GFI1Q99684 422 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 NICN1Q9BSH3 213 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 TM2D1Q9BX74 207 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 MBNL3Q9NUK0 354 aaKnown RBP16.29■□□□□ 0.2
SS18-224ENST00000584083 MOB4Q9Y3A3 225 aa16.29■□□□□ 0.2
SS18-224ENST00000584083 IGHV1-3A0A0C4DH29 117 aa16.28■□□□□ 0.2
SS18-224ENST00000584083 AMY1AP04745 511 aa16.28■□□□□ 0.2
SS18-224ENST00000584083 AMY2AP04746 511 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms