RNA–Protein interactions for RNA: ENST00000584014.5

ERBB2-216, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-216ENST00000584014 AP3S1Q92572 193 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 LEAP2Q969E1 77 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 S100A16Q96FQ6 103 aaKnown RBP6.85□□□□□ -1.31
ERBB2-216ENST00000584014 METTL8Q9H825 291 aaKnown RBP6.85□□□□□ -1.31
ERBB2-216ENST00000584014 DIABLOQ9NR28 239 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 TNFRSF19Q9NS68 423 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 CALYQ9NYX4 217 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 RCC2Q9P258 522 aaKnown RBP6.85□□□□□ -1.31
ERBB2-216ENST00000584014 RSL24D1Q9UHA3 163 aaKnown RBP6.85□□□□□ -1.31
ERBB2-216ENST00000584014 NUP50Q9UKX7 468 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 SPATA2Q9UM82 520 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 PRELID1Q9Y255 219 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 UBE2J1Q9Y385 318 aaPredicted RBP6.85□□□□□ -1.31
ERBB2-216ENST00000584014 ETV7Q9Y603 341 aa6.85□□□□□ -1.31
ERBB2-216ENST00000584014 CENPVL3A0A0U1RRI6 287 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 SMIM31A0A1B0GVY4 71 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 MEIOCA2RUB1 952 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 DPPA5A6NC42 116 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 ZNF729A6NN14 1252 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 M0R1W7 72 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 SDCBPO00560 298 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 TOR1AO14656 332 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 SPINT2O43291 252 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 CRLF1O75462 422 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 MMP23AO75900 390 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 CLPXO76031 633 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 ARG1P05089 322 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 CSN2P05814 226 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 IGHV1-8P0DP01 117 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 HIST1H1DP16402 221 aaKnown RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 HOXB4P17483 251 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 EPHA1P21709 976 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 FPR2P25090 351 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 SSTR5P35346 364 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 GDNFP39905 211 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 MNDAP41218 407 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 TMEM50BP56557 158 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 GNG2P59768 71 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 PLA1AQ53H76 456 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 RNASE12Q5GAN4 147 aaKnown RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 KLF17Q5JT82 389 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 UBE2NLQ5JXB2 153 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 C6orf183Q5T699 404 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 BAIAP2L2Q6UXY1 529 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 ZNF497Q6ZNH5 498 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 TCF23Q7RTU1 214 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 BCL6BQ8N143 479 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 FAM89BQ8N5H3 189 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 KIR3DL3Q8N743 410 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 ZBTB34Q8NCN2 500 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 OR10V1Q8NGI7 309 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 OR13D1Q8NGV5 346 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 OR1L1Q8NH94 360 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 MRPL30Q8TCC3 161 aaKnown RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 IL1F10Q8WWZ1 152 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 ACOT12Q8WYK0 555 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 DACT3Q96B18 629 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 UPRTQ96BW1 309 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 ST6GALNAC5Q9BVH7 336 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 C6orf62Q9GZU0 229 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 HEXA-AS1Q9H8Q6 139 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 TAF9BQ9HBM6 251 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 IDI2-AS1Q9NZ38 188 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 FBLN5Q9UBX5 448 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 ZNF230Q9UIE0 474 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 ELF5Q9UKW6 265 aaPredicted RBP6.84□□□□□ -1.31
ERBB2-216ENST00000584014 FAM96BQ9Y3D0 163 aa6.84□□□□□ -1.31
ERBB2-216ENST00000584014 HIVEP2P31629 2446 aa6.84□□□□□ -1.32
ERBB2-216ENST00000584014 DSCAML1Q8TD84 2053 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 IGHV1-69DA0A0B4J2H0 117 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 KBTBD11-OT1A0A1B0GTJ5 212 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 MDFIC2A0A1B0GVS7 189 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 A0A1W2PPE3 182 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 MEIS3P1A6NDR6 274 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 TMEM235A6NFC5 223 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 C17orf98A8MV24 154 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 RNASEK-C17orf49H0YIS7 233 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 RAB27BO00194 218 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 TUSC2O75896 110 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 SCGNO76038 276 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 IGHV1-69P01742 117 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 GLAP06280 429 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 EIF4EP06730 217 aaKnown RBP6.83□□□□□ -1.32
ERBB2-216ENST00000584014 PTHLHP12272 177 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 MMP9P14780 707 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 GZMHP20718 246 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 PRTN3P24158 256 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 PAX6P26367 422 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 CFPP27918 469 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 DLX6P56179 175 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 C17orf58Q2M2W7 97 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 TMEM69Q5SWH9 247 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 FOXB2Q5VYV0 432 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 NCR3LG1Q68D85 454 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 FAM53AQ6NSI3 398 aaPredicted RBP6.83□□□□□ -1.32
ERBB2-216ENST00000584014 RBMS3Q6XE24 437 aaKnown RBP6.83□□□□□ -1.32
ERBB2-216ENST00000584014 MCFD2Q8NI22 146 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 NUDCD2Q8WVJ2 157 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 CORO2AQ92828 525 aa6.83□□□□□ -1.32
ERBB2-216ENST00000584014 PTX4Q96A99 478 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms