RNA–Protein interactions for RNA: ENST00000583595.1

SS18-223, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-223ENST00000583595 OR52A1Q9UKL2 312 aa3.77□□□□□ -1.81
SS18-223ENST00000583595 FLVCR1Q9Y5Y0 555 aa3.77□□□□□ -1.81
SS18-223ENST00000583595 BAZ2BQ9UIF8 2168 aaKnown RBP3.76□□□□□ -1.81
SS18-223ENST00000583595 IGHV1OR21-1A0A087WYE8 117 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 C20orf202A1L168 122 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 GGT3PA6NGU5 568 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 SHISA9B4DS77 424 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 RNASEK-C17orf49H0YIS7 233 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 TNFRSF11BO00300 401 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 PLPP1O14494 284 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 B4GALT5O43286 388 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 CA11O75493 328 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ZNF432O94892 652 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 UBL3O95164 117 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ZNF682O95780 498 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ACTL6AO96019 429 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 IGKV3-20P01619 116 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 HLA-DPB1P04440 258 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 APODP05090 189 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ADRA2AP08913 450 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 LINC00032P0C843 101 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 SLC25A4P12235 298 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ANOS1P23352 680 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ARR3P36575 388 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 IFNGR2P38484 337 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 AQP2P41181 271 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 CAPZBP47756 277 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 CAV2P51636 162 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 RPS20P60866 119 aaKnown RBP3.76□□□□□ -1.81
SS18-223ENST00000583595 MAXP61244 160 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 STXBP1P61764 594 aaKnown RBP3.76□□□□□ -1.81
SS18-223ENST00000583595 RPS25P62851 125 aaKnown RBP3.76□□□□□ -1.81
SS18-223ENST00000583595 KHDC3LQ587J8 217 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 OLFML2AQ68BL7 652 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 GLT8D1Q68CQ7 371 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 HBMQ6B0K9 141 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ADAM5Q6NVV9 412 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ZNF774Q6NX45 483 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 DRAM2Q6UX65 266 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 CXCL17Q6UXB2 119 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 BHLHA15Q7RTS1 189 aaPredicted RBP3.76□□□□□ -1.81
SS18-223ENST00000583595 PPP1R27Q86WC6 154 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 DAW1Q8N136 415 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 LRRC52Q8N7C0 313 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 GATSQ8NAP1 163 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 OR10H4Q8NGA5 316 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 OR10G2Q8NGC3 310 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 OR2AP1Q8NGE2 309 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 OR5D18Q8NGL1 313 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 OR8U1Q8NH10 309 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 OR2V1Q8NHB1 315 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 VN1R17PQ8TDU5 208 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 THEM6Q8WUY1 208 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 BAALCQ8WXS3 180 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 FAM131CQ96AQ9 280 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 SMIM12Q96EX1 92 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 TEX37Q96LM6 180 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 PEBP4Q96S96 227 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 PHB2Q99623 299 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 PRRT1Q99946 306 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 FOXC2Q99958 501 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ZNF471Q9BX82 626 aaPredicted RBP3.76□□□□□ -1.81
SS18-223ENST00000583595 CHRNA10Q9GZZ6 450 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 DEFB129Q9H1M3 183 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 NOX3Q9HBY0 568 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 SCRT2Q9NQ03 307 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 CA10Q9NS85 328 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 MDFICQ9P1T7 246 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 CACFD1Q9UGQ2 172 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 NEU3Q9UQ49 428 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ZFP30Q9Y2G7 519 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 NEUROG3Q9Y4Z2 214 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 FOCADQ5VW36 1801 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 ARFGEF1Q9Y6D6 1849 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 LOXHD1Q8IVV2 1947 aa3.76□□□□□ -1.81
SS18-223ENST00000583595 NRXN2Q9P2S2 1712 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 BRCA1P38398 1863 aaKnown RBP3.75□□□□□ -1.81
SS18-223ENST00000583595 CACNA1SQ13698 1873 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 GON4LQ3T8J9 2241 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 RALGAPA1Q6GYQ0 2036 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 A0A0A6YYH2 397 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 ZNF816-ZNF321PA0A0X1KG74 233 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 A0A1B0GW15 77 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 C7orf77A4D0Y5 90 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 ARRDC5A6NEK1 342 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 A6NJ64 397 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 F6UB75 175 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 COCHO43405 550 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 ADAP1O75689 374 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 AIFM1O95831 613 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 CYB5R3P00387 301 aaPredicted RBP3.75□□□□□ -1.81
SS18-223ENST00000583595 IFNA21P01568 189 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 MT-ND4P03905 459 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 CD5P06127 495 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 BCHEP06276 602 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 EIF4EP06730 217 aaKnown RBP3.75□□□□□ -1.81
SS18-223ENST00000583595 NBEAP1P0C6P0 100 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 SFTA3P0C7M3 94 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 PGAM2P15259 253 aa3.75□□□□□ -1.81
SS18-223ENST00000583595 FOLR1P15328 257 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms