RNA–Protein interactions for RNA: ENST00000582594.5

PPP4R1-222, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene PPP4R1, Length 2,982 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-222ENST00000582594 TMEM42Q69YG0 159 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 LRP11Q86VZ4 500 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 SLC25A45Q8N413 288 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 UBALD1Q8TB05 177 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 GATAD1Q8WUU5 269 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 NDUFAF3Q9BU61 184 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 MAP1LC3BQ9GZQ8 125 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 SRD5A3Q9H8P0 318 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 TMEM242Q9NWH2 141 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 PSENENQ9NZ42 101 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 CACNG5Q9UF02 275 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 PRSS50Q9UI38 385 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 VAX2Q9UIW0 290 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 FUT9Q9Y231 359 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 ADAMTS20P59510 1910 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 TRAV1-1A0A0B4J248 108 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 TRAV39A0A0B4J263 110 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 LRRC3CA6NJW4 275 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 C2CD4DB7Z1M9 353 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 TGOLN2O43493 480 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 GDF9O60383 454 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 CNOT4O95628 575 aaKnown RBP8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 PAX1P15863 534 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 MDH2P40926 338 aaKnown RBP8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 GALR1P47211 349 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 NXPH1P58417 271 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 ABHD14BQ96IU4 210 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 TP53TG5Q9Y2B4 290 aa8.18□□□□□ -1.1
PPP4R1-222ENST00000582594 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 ZNF816-ZNF321PA0A0X1KG74 233 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 CLEC18AA5D8T8 446 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 TP53I11O14683 189 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 SERPINE2P07093 398 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 PFN1P07737 140 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 CCL2P13500 99 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 EDN3P14138 238 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 GLB1P16278 677 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 GPM6AP51674 278 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 HLA-BQ31612 363 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 SPANXN5Q5MJ07 72 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 SLC23A3Q6PIS1 610 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 C20orf204Q6ZNR8 217 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 RABEPKQ7Z6M1 372 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 HAPLN4Q86UW8 402 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 MRPL41Q8IXM3 137 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 ZNF525Q8N782 197 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 CLEC18CQ8NCF0 446 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 OR5D13Q8NGL4 314 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 IL1F10Q8WWZ1 152 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 LHX4Q969G2 390 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 ZNF488Q96MN9 340 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 NEU1Q99519 415 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 WNT5BQ9H1J7 359 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 TMEM38BQ9NVV0 291 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 IL36GQ9NZH8 169 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 DOCK11Q5JSL3 2073 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 UBE2L5PA0A1B0GUS4 154 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 PPP5D1E7EU14 171 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 H0Y980 276 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 H7BYZ3 331 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 HS3ST1O14792 307 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 ZIC3O60481 467 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 NUTF2P61970 127 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 RPS16P62249 146 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 FOXO1Q12778 655 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 TMEM241Q24JQ0 296 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 CEACAM16Q2WEN9 425 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 BSXQ3C1V8 233 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 C9orf135Q5VTT2 229 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 OR8G2PQ6IF36 304 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 PRR18Q8N4B5 295 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 NOL4LQ96MY1 436 aaPredicted RBP8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 MRPL37Q9BZE1 423 aaKnown RBP8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 SLC25A22Q9H936 323 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 CBLN4Q9NTU7 201 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 NAT8Q9UHE5 227 aa8.17□□□□□ -1.1
PPP4R1-222ENST00000582594 OR6C6A6NF89 314 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 DKK1O94907 266 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 IGKV1D-33P01593 117 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 IGKV1-33P01594 117 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 CST2P09228 141 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 F2RP25116 425 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 RPL23P62829 140 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 GNB2P62879 340 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 SLC10A1Q14973 349 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 MRGPRGQ86SM5 289 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 YRDCQ86U90 279 aaKnown RBP8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 MBD3L1Q8WWY6 194 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 RDH5Q92781 318 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 RAB24Q969Q5 203 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 OR5B12Q96R08 314 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 ACTR3CQ9C0K3 210 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 OR2H1Q9GZK4 316 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 CTDSP1Q9GZU7 261 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 FGF23Q9GZV9 251 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 SLC39A9Q9NUM3 307 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 ERRFI1Q9UJM3 462 aaPredicted RBP8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 PPP1R3CQ9UQK1 317 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 A0A1B0GUS0 222 aa8.16□□□□□ -1.1
PPP4R1-222ENST00000582594 CD300LBA8K4G0 201 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms