RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 TMEM56-RWDD3S4R434 201 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 HIVEP3Q5T1R4 2406 aa19.1■□□□□ 0.65
CCDC47-204ENST00000582252 IGKV1D-13A0A0B4J2D9 117 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 IGKV1-13P0DP09 117 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 NKX6-1P78426 367 aaPredicted RBP19.09■□□□□ 0.65
CCDC47-204ENST00000582252 HMGN3Q15651 99 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 TMEM268Q5VZI3 342 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 MEX3BQ6ZN04 569 aaKnown RBP19.09■□□□□ 0.65
CCDC47-204ENST00000582252 OR10V1Q8NGI7 309 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 IL1F10Q8WWZ1 152 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 RRNAD1Q96FB5 475 aaKnown RBP19.09■□□□□ 0.65
CCDC47-204ENST00000582252 HEATR1Q9H583 2144 aaKnown RBP19.09■□□□□ 0.65
CCDC47-204ENST00000582252 ZC4H2Q9NQZ6 224 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 CCL28Q9NRJ3 127 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 UFSP2Q9NUQ7 469 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 CFAP46Q8IYW2 2715 aa19.09■□□□□ 0.65
CCDC47-204ENST00000582252 C3orf80F5H4A9 247 aa19.08■□□□□ 0.65
CCDC47-204ENST00000582252 HSPA12AO43301 675 aa19.08■□□□□ 0.65
CCDC47-204ENST00000582252 CDS2O95674 445 aa19.08■□□□□ 0.65
CCDC47-204ENST00000582252 FAM90A1Q86YD7 464 aa19.08■□□□□ 0.65
CCDC47-204ENST00000582252 FOXRED2Q8IWF2 684 aa19.08■□□□□ 0.65
CCDC47-204ENST00000582252 IL22RA2Q969J5 263 aa19.08■□□□□ 0.65
CCDC47-204ENST00000582252 PLEKHA2Q9HB19 425 aa19.08■□□□□ 0.65
CCDC47-204ENST00000582252 LSM5Q9Y4Y9 91 aaKnown RBP19.08■□□□□ 0.65
CCDC47-204ENST00000582252 SESN1Q9Y6P5 492 aa19.08■□□□□ 0.65
CCDC47-204ENST00000582252 E5RGE8 158 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 H0Y980 276 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 WNT9BO14905 357 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 PTBP3O95758 552 aaKnown RBP19.08■□□□□ 0.64
CCDC47-204ENST00000582252 SCGB1D2O95969 90 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 FAM27E3Q08E93 113 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 SNTB1Q13884 538 aaKnown RBP19.08■□□□□ 0.64
CCDC47-204ENST00000582252 C5orf24Q7Z6I8 188 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 SLC35G3Q8N808 338 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 BVESQ8NE79 360 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 LRRC20Q8TCA0 184 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 AKR1E2Q96JD6 320 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 ERRFI1Q9UJM3 462 aaPredicted RBP19.08■□□□□ 0.64
CCDC47-204ENST00000582252 NSG2Q9Y328 171 aa19.08■□□□□ 0.64
CCDC47-204ENST00000582252 K7EPK0 472 aa19.07■□□□□ 0.64
CCDC47-204ENST00000582252 UCP1P25874 307 aa19.07■□□□□ 0.64
CCDC47-204ENST00000582252 FAM71E2Q8N5Q1 922 aa19.07■□□□□ 0.64
CCDC47-204ENST00000582252 LRRC29Q8WV35 223 aa19.07■□□□□ 0.64
CCDC47-204ENST00000582252 TAF9BQ9HBM6 251 aa19.07■□□□□ 0.64
CCDC47-204ENST00000582252 PRR14LQ5THK1 2151 aa19.06■□□□□ 0.64
CCDC47-204ENST00000582252 IGLV3-9A0A075B6K5 115 aa19.06■□□□□ 0.64
CCDC47-204ENST00000582252 OOEPA6NGQ2 149 aa19.06■□□□□ 0.64
CCDC47-204ENST00000582252 C16orf97H3BN30 126 aa19.06■□□□□ 0.64
CCDC47-204ENST00000582252 WNT2P09544 360 aa19.06■□□□□ 0.64
CCDC47-204ENST00000582252 OR5D13Q8NGL4 314 aa19.06■□□□□ 0.64
CCDC47-204ENST00000582252 DNTTIP1Q9H147 329 aa19.06■□□□□ 0.64
CCDC47-204ENST00000582252 SEBOXQ9HB31 216 aaPredicted RBP19.06■□□□□ 0.64
CCDC47-204ENST00000582252 MSGN1A6NI15 193 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP19.05■□□□□ 0.64
CCDC47-204ENST00000582252 RPL12P30050 165 aaKnown RBP19.05■□□□□ 0.64
CCDC47-204ENST00000582252 CFHR2P36980 270 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 CEBPDP49716 269 aaPredicted RBP19.05■□□□□ 0.64
CCDC47-204ENST00000582252 AANATQ16613 207 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 BAP18Q8IXM2 172 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 LHFPL5Q8TAF8 219 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 RBM7Q9Y580 266 aaKnown RBP19.05■□□□□ 0.64
CCDC47-204ENST00000582252 CCL21O00585 134 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 ST8SIA3O43173 380 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 KCNAB3O43448 404 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 PSPNO60542 156 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 PGLYRP1O75594 196 aaPredicted RBP19.05■□□□□ 0.64
CCDC47-204ENST00000582252 MBPP02686 304 aaPredicted RBP19.05■□□□□ 0.64
CCDC47-204ENST00000582252 HKR1P10072 659 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 CD40P25942 277 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 TRAT1Q6PIZ9 186 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 TMEM108Q6UXF1 575 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 LRP11Q86VZ4 500 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 SELENOHQ8IZQ5 122 aaKnown RBP19.05■□□□□ 0.64
CCDC47-204ENST00000582252 PRR18Q8N4B5 295 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 PPP1R35Q8TAP8 253 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 TMEM171Q8WVE6 324 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 RBPMSQ93062 196 aaKnown RBP19.05■□□□□ 0.64
CCDC47-204ENST00000582252 OR1A1Q9P1Q5 309 aa19.05■□□□□ 0.64
CCDC47-204ENST00000582252 SRRM5B3KS81 715 aa19.04■□□□□ 0.64
CCDC47-204ENST00000582252 ATP6V1G2-DDX39BF2Z307 99 aa19.04■□□□□ 0.64
CCDC47-204ENST00000582252 I3L521 148 aa19.04■□□□□ 0.64
CCDC47-204ENST00000582252 F2RP25116 425 aa19.04■□□□□ 0.64
CCDC47-204ENST00000582252 THOC7Q6I9Y2 204 aaKnown RBP19.04■□□□□ 0.64
CCDC47-204ENST00000582252 VHLLQ6RSH7 139 aa19.04■□□□□ 0.64
CCDC47-204ENST00000582252 GALMQ96C23 342 aa19.04■□□□□ 0.64
CCDC47-204ENST00000582252 ABHD14BQ96IU4 210 aa19.04■□□□□ 0.64
CCDC47-204ENST00000582252 CXorf58Q96LI9 332 aa19.04■□□□□ 0.64
CCDC47-204ENST00000582252 ZSCAN5BA6NJL1 495 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 MSMPQ1L6U9 139 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 TOR2AQ5JU69 321 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 NUP37Q8NFH4 326 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 MEGF10Q96KG7 1140 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 CYTL1Q9NRR1 136 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 SDHAF2Q9NX18 166 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 JKAMPQ9P055 326 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 POMT1Q9Y6A1 747 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 HEXAP06865 529 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 VDAC1P21796 283 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 PTAFRP25105 342 aa19.03■□□□□ 0.64
CCDC47-204ENST00000582252 PAX5Q02548 391 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms