RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	GNG12	Q9UBI6	72 aa		9.13	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CLEC2D	Q9UHP7	191 aa		9.13	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	TRAPPC2L	Q9UL33	140 aa		9.13	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	TRAV8-7	A0A075B6U6	113 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	PNMA8C	A0A1B0GUJ8	204 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	C12orf77	C9JDV5	145 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MOS	P00540	346 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MT-ND4	P03905	459 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SLC2A2	P11168	524 aa	Predicted RBP	9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	GTF2F2	P13984	249 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MYF6	P23409	242 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	IL3RA	P26951	378 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SLC6A1	P30531	599 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MPV17L	Q2QL34	196 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CCDC58	Q4VC31	144 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SYT6	Q5T7P8	510 aa	Predicted RBP	9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ZNF497	Q6ZNH5	498 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	C5orf24	Q7Z6I8	188 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	LINC00596	Q86U02	117 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	STX19	Q8N4C7	294 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	JAGN1	Q8N5M9	183 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	LINC00311	Q8N616	119 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	TMEM104	Q8NE00	496 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	OR1L1	Q8NH94	360 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	GHSR	Q92847	366 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ST6GALNAC6	Q969X2	333 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SMIM19	Q96E16	107 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	S1PR3	Q99500	378 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	BANF2	Q9H503	90 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	S100A14	Q9HCY8	104 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ETAA1	Q9NY74	926 aa		9.12	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	OGG1	O15527	345 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ORC5	O43913	435 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	BAG2	O95816	211 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	HBZ	P02008	142 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	IGFBP3	P17936	291 aa	Predicted RBP	9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MYL12A	P19105	171 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	VDAC1	P21796	283 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CD1B	P29016	333 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	VHL	P40337	213 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ECI1	P42126	302 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ZNF134	P52741	427 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	FOXE3	Q13461	319 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CT45A1	Q5HYN5	189 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	GLIPR1L1	Q6UWM5	242 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SLC25A48	Q6ZT89	311 aa	Known RBP	9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	PQLC1	Q8N2U9	271 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ZNF555	Q8NEP9	628 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	OR52M1	Q8NGK5	317 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	OR5M8	Q8NGP6	311 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	OR8U1	Q8NH10	309 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CT45A3	Q8NHU0	189 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	WWC2-AS2	Q96NR7	200 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	BABAM2	Q9NXR7	383 aa		9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MRPS28	Q9Y2Q9	187 aa	Known RBP	9.11	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	TRBV5-5	A0A0J9YX44	114 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	UBE2QL1	A1L167	161 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SEC14L6	B5MCN3	397 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MCRIP1	C9JLW8	97 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SPINT2	O43291	252 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	RRP9	O43818	475 aa	Known RBP	9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ZNF780A	O75290	641 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MAS1	P04201	325 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	RCC1	P18754	421 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	DCK	P27707	260 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SOX6	P35712	828 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ADARB1	P78563	741 aa	Known RBP	9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	GNMT	Q14749	295 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	KIR2DS1	Q14954	304 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	AWAT2	Q6E213	333 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	RAB12	Q6IQ22	244 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ZNF439	Q8NDP4	499 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CYGB	Q8WWM9	190 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	KCTD7	Q96MP8	289 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	OR14A2	Q96R54	314 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ASCL2	Q99929	193 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SELENOI	Q9C0D9	397 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SMPD3	Q9NY59	655 aa	Predicted RBP	9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CKLF	Q9UBR5	152 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	PEX16	Q9Y5Y5	336 aa		9.1	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CRTAP	O75718	401 aa	Predicted RBP	9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	ELANE	P08246	267 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CNTFR	P26992	372 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CDX1	P47902	265 aa	Predicted RBP	9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	RPS11	P62280	158 aa	Known RBP eCLIP	9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	CFHR3	Q02985	330 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	MMD	Q15546	238 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	LRRC36	Q1X8D7	754 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114		Q499Y3	187 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	C9orf66	Q5T8R8	295 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	DMKN	Q6E0U4	476 aa	Predicted RBP	9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	FAM71E2	Q8N5Q1	922 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	C8orf31	Q8N9H6	132 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	FAM46B	Q96A09	425 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	PGLYRP3	Q96LB9	341 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	OR5B12	Q96R08	314 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	GON7	Q9BXV9	100 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	SPACA1	Q9HBV2	294 aa		9.09	□□□□□ -0.95
CDK5RAP3-223	ENST00000582114	RCC2	Q9P258	522 aa	Known RBP	9.09	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms