RNA–Protein interactions for RNA: ENST00000581598.1

CCDC42-203, Transcript of coiled-coil domain containing 42, humanhuman

TSL 4

Gene CCDC42, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-203ENST00000581598 AIPO00170 330 aa16.74■□□□□ 0.27
CCDC42-203ENST00000581598 TMEM127O75204 238 aa16.74■□□□□ 0.27
CCDC42-203ENST00000581598 PEX14O75381 377 aa16.74■□□□□ 0.27
CCDC42-203ENST00000581598 PRRX1P54821 245 aa16.74■□□□□ 0.27
CCDC42-203ENST00000581598 ATXN7L3Q14CW9 347 aaPredicted RBP16.74■□□□□ 0.27
CCDC42-203ENST00000581598 C17orf58Q2M2W7 97 aa16.74■□□□□ 0.27
CCDC42-203ENST00000581598 JAGN1Q8N5M9 183 aa16.74■□□□□ 0.27
CCDC42-203ENST00000581598 LINC00574Q9H8X3 128 aa16.74■□□□□ 0.27
CCDC42-203ENST00000581598 KBTBD11-OT1A0A1B0GTJ5 212 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 BUB1B-PAK6H3BSN5 160 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 ZNF182P17025 639 aaPredicted RBP16.73■□□□□ 0.27
CCDC42-203ENST00000581598 KCNJ3P48549 501 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 RORCP51449 518 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 NSUN5P1Q3KNT7 163 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 TPTE2P1Q5T6R2 138 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 ZNF565Q8N9K5 539 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 OR4F17Q8NGA8 305 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 OR6M1Q8NGM8 313 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 OR4F4Q96R69 305 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 CITED2Q99967 270 aaPredicted RBP16.73■□□□□ 0.27
CCDC42-203ENST00000581598 NOTCH3Q9UM47 2321 aa16.73■□□□□ 0.27
CCDC42-203ENST00000581598 TRAV24A0A0B4J272 114 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 TOR1AO14656 332 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 OR2F2O95006 317 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 OR3A4PP47883 348 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 CNPY1Q3B7I2 92 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 PAN3Q58A45 887 aaKnown RBP16.72■□□□□ 0.27
CCDC42-203ENST00000581598 ARSJQ5FYB0 599 aaPredicted RBP16.72■□□□□ 0.27
CCDC42-203ENST00000581598 CCDC144NLQ6NUI1 221 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 TNFAIP8L1Q8WVP5 186 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 KIRREL1Q96J84 757 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 RBM14Q96PK6 669 aaKnown RBP16.72■□□□□ 0.27
CCDC42-203ENST00000581598 GPER1Q99527 375 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 STEAP1Q9UHE8 339 aa16.72■□□□□ 0.27
CCDC42-203ENST00000581598 HTR2CP28335 458 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 CD83Q01151 205 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 RAB11BQ15907 218 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 TMEM95Q3KNT9 176 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 HES5Q5TA89 166 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 LYG1Q8N1E2 194 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 OR9G1Q8NH87 305 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 CAPSLQ8WWF8 208 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 KCTD12Q96CX2 325 aaKnown RBP16.71■□□□□ 0.27
CCDC42-203ENST00000581598 SLC25A33Q9BSK2 321 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 DCUN1D5Q9BTE7 237 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 SLIRPQ9GZT3 109 aaKnown RBP16.71■□□□□ 0.27
CCDC42-203ENST00000581598 MMP28Q9H239 520 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 PLGRKTQ9HBL7 147 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 PCDHB16Q9NRJ7 776 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 IL36GQ9NZH8 169 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 DAPK2Q9UIK4 370 aa16.71■□□□□ 0.27
CCDC42-203ENST00000581598 FAM172BPA6NC97 362 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 SLC2A2P11168 524 aaPredicted RBP16.7■□□□□ 0.26
CCDC42-203ENST00000581598 SOX6P35712 828 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 MNDAP41218 407 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 RANBP1P43487 201 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 NHLRC3Q5JS37 347 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 RSBN1Q5VWQ0 802 aaPredicted RBP16.7■□□□□ 0.26
CCDC42-203ENST00000581598 OR10A7Q8NGE5 316 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 OR13A1Q8NGR1 328 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 R3HDM4Q96D70 268 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 IFT22Q9H7X7 185 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 ING3Q9NXR8 418 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 CALYQ9NYX4 217 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 KIF25Q9UIL4 384 aa16.7■□□□□ 0.26
CCDC42-203ENST00000581598 MRPS28Q9Y2Q9 187 aaKnown RBP16.7■□□□□ 0.26
CCDC42-203ENST00000581598 MEIKINA0A087WXM9 373 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 NPIPB11E5RHQ5 1161 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 M0QZK8 103 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 CD24P25063 80 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 GLP1RP43220 463 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 SCAND1P57086 179 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 RSU1Q15404 277 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 IDNKQ5T6J7 187 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 REC114Q7Z4M0 266 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 THNSL2Q86YJ6 484 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 OR5AU1Q8NGC0 362 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 NXF2Q9GZY0 626 aaKnown RBP16.69■□□□□ 0.26
CCDC42-203ENST00000581598 IDI2-AS1Q9NZ38 188 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 ABRACLQ9P1F3 81 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 GHRLQ9UBU3 117 aa16.69■□□□□ 0.26
CCDC42-203ENST00000581598 AMMECR1Q9Y4X0 333 aaPredicted RBP16.69■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A18PA6NE21 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A16PA6NEW6 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A20PA6NIJ5 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A9PA6NNJ1 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A12PA8MX19 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A5PA8MXJ8 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 J3QR06 171 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 HSPB6O14558 160 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 BPNT1O95861 308 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 AMY1AP04745 511 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 AMY2AP04746 511 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A15PP0C7V4 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A13PP0C7W8 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A14PP0C7W9 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 FAM90A24PP0C7X0 464 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 UBBP0CG47 229 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 NFYBP25208 207 aa16.68■□□□□ 0.26
CCDC42-203ENST00000581598 CLDN12P56749 244 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms