RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 HNRNPA3P51991 378 aaKnown RBP3.25□□□□□ -1.89
SMG8-205ENST00000580798 BACE1P56817 501 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 DEFA1P59665 94 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 DEFA3P59666 94 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 MXD1Q05195 221 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 FABP9Q0Z7S8 132 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 SIX1Q15475 284 aaPredicted RBP3.25□□□□□ -1.89
SMG8-205ENST00000580798 OR7A5Q15622 319 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 ZNF404Q494X3 552 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 TIGITQ495A1 244 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 SPANXN3Q5MJ09 141 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 GDPGP1Q6ZNW5 385 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 C9orf139Q6ZV77 190 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 TMEM219Q86XT9 240 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 TMEM229BQ8NBD8 167 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 OR2T33Q8NG76 320 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 OR5AR1Q8NGP9 310 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 OR10D3Q8NH80 312 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 OR1S1Q8NH92 325 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 ZNF420Q8TAQ5 688 aaPredicted RBP3.25□□□□□ -1.89
SMG8-205ENST00000580798 CT55Q8WUE5 264 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 FAM151AQ8WW52 585 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 DEDD2Q8WXF8 326 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 TMEM230Q96A57 120 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 PLEKHB2Q96CS7 222 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 PHYHIPLQ96FC7 376 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 AP1S3Q96PC3 154 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 LYSMD1Q96S90 227 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 KIR2DL4Q99706 377 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 MRPL57Q9BQC6 102 aaKnown RBP3.25□□□□□ -1.89
SMG8-205ENST00000580798 FAM173AQ9BQD7 235 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 NRIP2Q9BQI9 281 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 EMC6Q9BV81 110 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 CHST6Q9GZX3 395 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 IFI27L2Q9H2X8 130 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 SRMSQ9H3Y6 488 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 Q9HAA7 133 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 SAR1AQ9NR31 198 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 SPHK2Q9NRA0 654 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 FAM49BQ9NUQ9 324 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 MMP17Q9ULZ9 603 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 TNFSF18Q9UNG2 199 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 SOX21Q9Y651 276 aaPredicted RBP3.25□□□□□ -1.89
SMG8-205ENST00000580798 TNS3Q68CZ2 1445 aa3.25□□□□□ -1.89
SMG8-205ENST00000580798 MED14O60244 1454 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 COL22A1Q8NFW1 1626 aaPredicted RBP3.24□□□□□ -1.89
SMG8-205ENST00000580798 TRAV8-2A0A0B4J237 113 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 TRAV5A0A0B4J249 113 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 TRBV5-5A0A0J9YX44 114 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 DUXBA0A1W2PPF3 345 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 RIIAD1A6NNX1 92 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 C9JAW5 83 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 CLDN25C9JDP6 229 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 F6UB75 175 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 SAP18O00422 153 aaKnown RBP3.24□□□□□ -1.89
SMG8-205ENST00000580798 REM1O75628 298 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 CLDN14O95500 239 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 SLC2A10O95528 541 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 OXTP01178 125 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 CD48P09326 243 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 SCTP09683 121 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 CT45A10P0DMU9 189 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 TDGF1P13385 188 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 SELEP16581 610 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 GABRG2P18507 467 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 RCC1P18754 421 aaPredicted RBP3.24□□□□□ -1.89
SMG8-205ENST00000580798 NTF3P20783 257 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 CNTFRP26992 372 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 BLVRBP30043 206 aaPredicted RBP3.24□□□□□ -1.89
SMG8-205ENST00000580798 MIPP30301 263 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 TSPOP30536 169 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 BRS3P32247 399 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 ATP4BP51164 291 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 UBE2E1P51965 193 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 SLC18A1P54219 525 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 RND3P61587 244 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 HBG1P69891 147 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 HBG2P69892 147 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 PSG9Q00887 426 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 CAV1Q03135 178 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 PRDX1Q06830 199 aaKnown RBP3.24□□□□□ -1.89
SMG8-205ENST00000580798 C1DQ13901 141 aaKnown RBP3.24□□□□□ -1.89
SMG8-205ENST00000580798 ZNF181Q2M3W8 571 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 MS4A13Q5J8X5 152 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 NHLRC3Q5JS37 347 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 ATP1A1-AS1Q5TC04 95 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 OLFML2AQ68BL7 652 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 PRSS48Q7RTY5 328 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 NEGR1Q7Z3B1 354 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 P2RY8Q86VZ1 359 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 HOGA1Q86XE5 327 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 ZNF695Q8IW36 515 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 GAPTQ8N292 157 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 TMEM86AQ8N2M4 240 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 OR4M1Q8NGD0 313 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 PPTC7Q8NI37 304 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 BLNKQ8WV28 456 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 SECTM1Q8WVN6 248 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 SLAMF6Q96DU3 332 aa3.24□□□□□ -1.89
SMG8-205ENST00000580798 TMEM101Q96IK0 257 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms