RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 RGS21Q2M5E4 152 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 KRBOX4Q5JUW0 171 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 OLFML2AQ68BL7 652 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 ZNF880Q6PDB4 577 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 TRAT1Q6PIZ9 186 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 ZNF497Q6ZNH5 498 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 LURAP1LQ8IV03 231 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 ZNF581Q9P0T4 197 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 OPN4Q9UHM6 478 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 SVEP1Q4LDE5 3571 aa12.77□□□□□ -0.37
SS18-216ENST00000580751 hCG_1809904A0A1W2PP81 198 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 A0A1W2PPE2 198 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 A0A1W2PR64 198 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 A0A1W2PRV1 198 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 ODAMA1E959 279 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 UBE2QL1A1L167 161 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 ZNF736B4DX44 427 aaPredicted RBP12.76□□□□□ -0.37
SS18-216ENST00000580751 M0R1W7 72 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 TOX4O94842 621 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 MT-ND4P03905 459 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 ARF6P62330 175 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 AESQ08117 197 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 TMEM200BQ69YZ2 307 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 C1orf122Q6ZSJ8 110 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 BPIFB2Q8N4F0 458 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 TPRX1Q8N7U7 411 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 GCDHQ92947 438 aaPredicted RBP12.76□□□□□ -0.37
SS18-216ENST00000580751 UPRTQ96BW1 309 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 COQ2Q96H96 371 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 BEX2Q9BXY8 128 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 SIRPDQ9H106 197 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 ZNF286AQ9HBT8 521 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 MBNL3Q9NUK0 354 aaKnown RBP12.76□□□□□ -0.37
SS18-216ENST00000580751 ELF5Q9UKW6 265 aaPredicted RBP12.76□□□□□ -0.37
SS18-216ENST00000580751 LINC00312Q9Y6C7 94 aa12.76□□□□□ -0.37
SS18-216ENST00000580751 NF1P21359 2839 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 MXRA5Q9NR99 2828 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 TRGV10A0A0A0MS01 117 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 PLA2G10O15496 165 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 LYRM1O43325 122 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 AVPP01185 164 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 CTXN2P0C2S0 81 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
SS18-216ENST00000580751 ZNF273Q14593 569 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 CHRFAM7AQ494W8 412 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 VAX1Q5SQQ9 334 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 RSBN1Q5VWQ0 802 aaPredicted RBP12.75□□□□□ -0.37
SS18-216ENST00000580751 STEAP1BQ6NZ63 245 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 POC5Q8NA72 575 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 BEST4Q8NFU0 473 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 NANPQ8TBE9 248 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 PCGF1Q9BSM1 259 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 METTL8Q9H825 291 aaKnown RBP12.75□□□□□ -0.37
SS18-216ENST00000580751 CHMP1AQ9HD42 196 aaPredicted RBP12.75□□□□□ -0.37
SS18-216ENST00000580751 Q9N2K0 584 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 RAB9BQ9NP90 201 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 OR6C3Q9NZP0 311 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 COPZ2Q9P299 210 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 TBC1D24Q9ULP9 559 aa12.75□□□□□ -0.37
SS18-216ENST00000580751 UBE2J1Q9Y385 318 aaPredicted RBP12.75□□□□□ -0.37
SS18-216ENST00000580751 MEIKINA0A087WXM9 373 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 CRLF1O75462 422 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 RBP4P02753 201 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 ZNF728P0DKX0 622 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 MMP9P14780 707 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 GZMHP20718 246 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 GLIPR1P48060 266 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 RNASE10Q5GAN6 216 aaKnown RBP12.74□□□□□ -0.37
SS18-216ENST00000580751 C6orf183Q5T699 404 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 BRICD5Q6PL45 260 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 C1orf229Q6ZS94 237 aaPredicted RBP12.74□□□□□ -0.37
SS18-216ENST00000580751 TCF23Q7RTU1 214 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 ARRDC1Q8N5I2 433 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 OR5AP2Q8NGF4 316 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 OR4K15Q8NH41 348 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 PLPPR1Q8TBJ4 325 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 MRPL30Q8TCC3 161 aaKnown RBP12.74□□□□□ -0.37
SS18-216ENST00000580751 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 ST6GALNAC5Q9BVH7 336 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 GAL3ST2Q9H3Q3 398 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 ING3Q9NXR8 418 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 KIF25Q9UIL4 384 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 ANXA10Q9UJ72 324 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 DSCAML1Q8TD84 2053 aa12.74□□□□□ -0.37
SS18-216ENST00000580751 ANK3Q12955 4377 aaKnown RBP12.73□□□□□ -0.37
SS18-216ENST00000580751 RAB3DO95716 219 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 CCL3L1P16619 93 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 SCGB2A2Q13296 93 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 RNASE12Q5GAN4 147 aaKnown RBP12.73□□□□□ -0.37
SS18-216ENST00000580751 IL17RELQ6ZVW7 336 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 VMO1Q7Z5L0 202 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 RTN4RL2Q86UN3 420 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 ZNF565Q8N9K5 539 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 DUSP18Q8NEJ0 188 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 CHPT1Q8WUD6 406 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 CORO2AQ92828 525 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 SNAPC3Q92966 411 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 TBX15Q96SF7 602 aa12.73□□□□□ -0.37
SS18-216ENST00000580751 UNKLQ9H9P5 680 aaKnown RBP12.73□□□□□ -0.37
SS18-216ENST00000580751 HRASLSQ9HDD0 168 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms