RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 OCSTAMPQ9BR26 566 aa16.11■□□□□ 0.17
SMG8-204ENST00000580498 ISYNA1Q9NPH2 558 aa16.11■□□□□ 0.17
SMG8-204ENST00000580498 GFOD1Q9NXC2 390 aa16.11■□□□□ 0.17
SMG8-204ENST00000580498 SNRNP70P08621 437 aaKnown RBP16.1■□□□□ 0.17
SMG8-204ENST00000580498 LIPKQ5VXJ0 399 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 MOB3BQ86TA1 216 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 ZNF554Q86TJ5 538 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 PRR18Q8N4B5 295 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 LINC00311Q8N616 119 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 DRAM1Q8N682 238 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 OR5AU1Q8NGC0 362 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 TMEM59Q9BXS4 323 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 WNT10AQ9GZT5 417 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 LRRC42Q9Y546 428 aa16.1■□□□□ 0.17
SMG8-204ENST00000580498 RGS11O94810 467 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 BPNT1O95861 308 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 CD28P10747 220 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 HTR2CP28335 458 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 ZNF816Q0VGE8 651 aaPredicted RBP16.09■□□□□ 0.17
SMG8-204ENST00000580498 NKAPLQ5M9Q1 402 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 IZUMO2Q6UXV1 221 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 PRSS48Q7RTY5 328 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 OR6M1Q8NGM8 313 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 OR4K15Q8NH41 348 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 NRG4Q8WWG1 115 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 R3HDM4Q96D70 268 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 URM1Q9BTM9 101 aaKnown RBP16.09■□□□□ 0.17
SMG8-204ENST00000580498 DUSP21Q9H596 190 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 PLGRKTQ9HBL7 147 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 ZNF581Q9P0T4 197 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 ABRACLQ9P1F3 81 aa16.09■□□□□ 0.17
SMG8-204ENST00000580498 LSM2Q9Y333 95 aaKnown RBP16.09■□□□□ 0.17
SMG8-204ENST00000580498 UBE2QL1A1L167 161 aa16.08■□□□□ 0.16
SMG8-204ENST00000580498 C15orf65H3BRN8 121 aa16.08■□□□□ 0.16
SMG8-204ENST00000580498 MLLT11Q13015 90 aaPredicted RBP16.08■□□□□ 0.16
SMG8-204ENST00000580498 TMEM104Q8NE00 496 aa16.08■□□□□ 0.16
SMG8-204ENST00000580498 CITED2Q99967 270 aaPredicted RBP16.08■□□□□ 0.16
SMG8-204ENST00000580498 IGHV3-43A0A0B4J1X8 118 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 A0A1W2PPE3 182 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 A0A1W2PPI3 338 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 FAM90A9PA6NNJ1 464 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 C12orf77C9JDV5 145 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 FGF16O43320 207 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 WIPF1O43516 503 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 IGKV1D-33P01593 117 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 IGKV1-33P01594 117 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 UCHL1P09936 223 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 IGHV3-43DP0DP04 118 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 PF4V1P10720 104 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 PSMD7P51665 324 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 IRF3Q14653 427 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 TMEM95Q3KNT9 176 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 KHDC1LQ5JSQ8 128 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 STEAP3Q658P3 488 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 OR2T10Q8NGZ9 312 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 TMEM203Q969S6 136 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 CNBD2Q96M20 576 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 Q9H521 79 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 CHMP1AQ9HD42 196 aaPredicted RBP16.07■□□□□ 0.16
SMG8-204ENST00000580498 OR2S2Q9NQN1 319 aa16.07■□□□□ 0.16
SMG8-204ENST00000580498 TRRAPQ9Y4A5 3859 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 IGHV1-3A0A0C4DH29 117 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 TCRBV4S1A1TA0A5B7 111 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 SC5DO75845 299 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 HBZP02008 142 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 CRHBPP24387 322 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 TPBGQ13641 420 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 HNF4GQ14541 408 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 PDLIM3Q53GG5 364 aaPredicted RBP16.06■□□□□ 0.16
SMG8-204ENST00000580498 C1orf100Q5SVJ3 147 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 FAM27D1Q5T7N8 215 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 LRRTM1Q86UE6 522 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 TGIF2LXQ8IUE1 241 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 FOXRED2Q8IWF2 684 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 UBALD1Q8TB05 177 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 TAF9BQ9HBM6 251 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 RAB26Q9ULW5 256 aa16.06■□□□□ 0.16
SMG8-204ENST00000580498 TSSC4Q9Y5U2 329 aaPredicted RBP16.06■□□□□ 0.16
SMG8-204ENST00000580498 NCBP2LA6PVI3 153 aaKnown RBP16.05■□□□□ 0.16
SMG8-204ENST00000580498 VSIG8P0DPA2 414 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 CPEP16870 476 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 LOXL3P58215 753 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 RPS27AP62979 156 aaKnown RBP16.05■□□□□ 0.16
SMG8-204ENST00000580498 SLC35B1P78383 322 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 INSL4Q14641 139 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 Q6ZS46 218 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 LYPD6Q86Y78 171 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 LYG1Q8N1E2 194 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 GAPTQ8N292 157 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 CHPT1Q8WUD6 406 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 GALMQ96C23 342 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 MGLLQ99685 303 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 RIMS4Q9H426 269 aaPredicted RBP16.05■□□□□ 0.16
SMG8-204ENST00000580498 ACOT13Q9NPJ3 140 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 PLEKHJ1Q9NW61 149 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 JPT1Q9UK76 154 aa16.05■□□□□ 0.16
SMG8-204ENST00000580498 SLC22A1O15245 554 aa16.04■□□□□ 0.16
SMG8-204ENST00000580498 PF4P02776 101 aa16.04■□□□□ 0.16
SMG8-204ENST00000580498 ARSBP15848 533 aa16.04■□□□□ 0.16
SMG8-204ENST00000580498 CD1BP29016 333 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms