RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 USP9XQ93008 2570 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CEACAM18A8MTB9 384 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 IQCF6A8MYZ5 107 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CDIPTO14735 213 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SPP1P10451 314 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 KCNJ3P48549 501 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RAB32Q13637 225 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SP6Q3SY56 376 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 C10orf91Q5T1B1 145 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TMEM108Q6UXF1 575 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZCCHC24Q8N2G6 241 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR8G5Q8NG78 346 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR5A2Q8NGI9 324 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 C2CD4CQ8TF44 421 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 EAF1Q96JC9 268 aaPredicted RBP10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 UFSP2Q9NUQ7 469 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 J3QW42 95 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 FGF16O43320 207 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 FUT3P21217 361 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 BLOC1S1P78537 153 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR8G1Q15617 311 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ABCA11PQ4W5N1 156 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PRAMEF6Q5VXH4 476 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SGPP2Q8IWX5 399 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SPAG16Q8N0X2 631 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MRPL37Q9BZE1 423 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TLNRD1Q9H1K6 362 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZNF286AQ9HBT8 521 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TMEM100Q9NV29 134 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CARHSP1Q9Y2V2 147 aaKnown RBP10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MPC1Q9Y5U8 109 aa10.73□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TRAPPC2LH3BP13 241 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PLAUP00749 431 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 IFNA2P01563 188 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 FCGR2CP31995 323 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 NPBWR1P48145 328 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 GNG3P63215 75 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RELQ04864 619 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZNF154Q13106 437 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 DAZAP2Q15038 168 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 GLYATL2Q8WU03 294 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 IL36GQ9NZH8 169 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 HRNRQ86YZ3 2850 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RPS2P15880 293 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RCC1P18754 421 aaPredicted RBP10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 DTYMKP23919 212 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 GLRXP35754 106 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CYCSP99999 105 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PHLDA2Q53GA4 152 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZFP82Q8N141 532 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 DMBX1Q8NFW5 382 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR2Z1Q8NG97 314 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PLPPR2Q96GM1 343 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PARP12Q9H0J9 701 aaKnown RBP10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR51I2Q9H344 312 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RAB18Q9NP72 206 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 KCNJ16Q9NPI9 418 aa10.72□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SPRY3O43610 288 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 CRYBA1P05813 215 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 GLAP06280 429 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZNF728P0DKX0 622 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PIGPP57054 158 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SURF2Q15527 256 aaPredicted RBP10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MBNL2Q5VZF2 373 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SCCPDHQ8NBX0 429 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RXFP4Q8TDU9 374 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SFT2D1Q8WV19 159 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 RNASE6Q93091 150 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PIK3IP1Q96FE7 263 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 NMES1Q9C002 83 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ZFP57Q9NU63 452 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TREM2Q9NZC2 230 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 ATP23Q9Y6H3 246 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SIAH2O43255 324 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 TFF1P04155 84 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 KITLGP21583 273 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 PTAFRP25105 342 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 AVPI1Q5T686 147 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MEX3BQ6ZN04 569 aaKnown RBP10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MKXQ8IYA7 352 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 OR4A4PQ8NGN8 299 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 SMIM3Q9BZL3 60 aa10.71□□□□□ -0.69
CDK5RAP3-217ENST00000580287 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 EIF3GO75821 320 aaKnown RBP eCLIP10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 IFNA4P05014 189 aa10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 GLP1RP43220 463 aa10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ARL11Q969Q4 196 aa10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 GPHA2Q96T91 129 aa10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CYTL1Q9NRR1 136 aa10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 C1orf123Q9NWV4 160 aa10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TAAR3PQ9P1P4 343 aa10.71□□□□□ -0.7
CDK5RAP3-217ENST00000580287 MEX3AA1L020 520 aaKnown RBP10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 WNT9BO14905 357 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 AGPAT2O15120 278 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 SNAPINO95295 136 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 CTSDP07339 412 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 ECI1P42126 302 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 KLF3P57682 345 aaPredicted RBP10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 TFF3Q07654 80 aa10.7□□□□□ -0.7
CDK5RAP3-217ENST00000580287 WDR73Q6P4I2 378 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms