RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	SLAMF9	Q96A28	289 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	RNF125	Q96EQ8	232 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	CGREF1	Q99674	301 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	RARRES2	Q99969	163 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	ZNF251	Q9BRH9	671 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	ABHD6	Q9BV23	337 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	OR52D1	Q9H346	318 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	ANKRD19P	Q9H560	264 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	GPR173	Q9NS66	373 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	MRPS18A	Q9NVS2	196 aa	Known RBP	4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	TECR	Q9NZ01	308 aa	Known RBP	4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	MTCH1	Q9NZJ7	389 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	CNOT2	Q9NZN8	540 aa	Known RBP	4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	DHDH	Q9UQ10	334 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	DMRT1	Q9Y5R6	373 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158	A3GALT2	U3KPV4	340 aa		4.41	□□□□□ -1.7
KPNB1-209	ENST00000580158		A0A0B4J203	849 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	TRAV10	A0A0B4J240	114 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	KIR2DL5B	A0A0G2JN68	375 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	KIR2DL5B	A0A0G2JPC4	375 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158		A0A0U1RQV5	110 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158		A0A1W2PPE3	182 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	FAM230A	A0A1W2PPH8	454 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZNF736	B4DX44	427 aa	Predicted RBP	4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158		F8VVB4	439 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158		F8VWA3	439 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	DUSP1	P28562	367 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	HTR1F	P30939	366 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	OPRL1	P41146	370 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	GLP1R	P43220	463 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	OMP	P47874	163 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	SNU13	P55769	128 aa	Known RBP	4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	RAP2B	P61225	183 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZNF146	Q15072	292 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	WHAMMP3	Q1A5X7	153 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	LRRC36	Q1X8D7	754 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	DEFB114	Q30KQ6	69 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	AKIRIN2	Q53H80	203 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	SPIN3	Q5JUX0	258 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZNF660	Q6AZW8	331 aa	Predicted RBP	4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	UNQ5815/PRO19632	Q6UWF5	114 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158		Q6ZR54	194 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	SLC15A3	Q8IY34	581 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	KIR2DL5A	Q8N109	375 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	FAM58A	Q8N1B3	248 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	NKAIN3	Q8N8D7	197 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	TMEM104	Q8NE00	496 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR10A7	Q8NGE5	316 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR13A1	Q8NGR1	328 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR6K6	Q8NGW6	343 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR6N2	Q8NGY6	317 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	KIR2DL5B	Q8NHK3	375 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR52B2	Q96RD2	323 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	RNF126	Q9BV68	326 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	OSBPL10	Q9BXB5	764 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	ANKRD60	Q9BZ19	345 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	C11orf68	Q9H3H3	251 aa	Known RBP	4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	EXOSC4	Q9NPD3	245 aa	Known RBP	4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	CALY	Q9NYX4	217 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	PEF1	Q9UBV8	284 aa	Known RBP	4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	NUBP2	Q9Y5Y2	271 aa		4.4	□□□□□ -1.71
KPNB1-209	ENST00000580158	FFAR1	O14842	300 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	NBR2	O15453	112 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	E2F6	O75461	281 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	DHRS3	O75911	302 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	OR2H2	O95918	312 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	IL1A	P01583	271 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	CSN2	P05814	226 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZNF44	P15621	663 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	NCK1	P16333	377 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	PRKACA	P17612	351 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	AADAC	P22760	399 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	MRPL19	P49406	292 aa	Known RBP	4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	CRIP2	P52943	208 aa	Predicted RBP	4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	ACTB	P60709	375 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	SCN1B	Q07699	218 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	BAK1	Q16611	211 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	AGK	Q53H12	422 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	ERICH5	Q6P6B1	374 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	CD200R1L	Q6Q8B3	271 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158		Q6ZRM9	215 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	SLC25A26	Q70HW3	274 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	SPATA12	Q7Z6I5	190 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	PPP1R27	Q86WC6	154 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	ERI1	Q8IV48	349 aa	Known RBP	4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	MRGPRD	Q8TDS7	321 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	THEM6	Q8WUY1	208 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZNRF4	Q8WWF5	429 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	SNAPC3	Q92966	411 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	INTS14	Q96SY0	518 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	SH3GL1	Q99961	368 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	CADM1	Q9BY67	442 aa	Known RBP	4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	SLC25A32	Q9H2D1	315 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	GPR84	Q9NQS5	396 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	ZC4H2	Q9NQZ6	224 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	MRGBP	Q9NV56	204 aa		4.39	□□□□□ -1.71
KPNB1-209	ENST00000580158	IL36RN	Q9UBH0	155 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms