RNA–Protein interactions for RNA: ENST00000578317.5

COPS3-215, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-215ENST00000578317 RPS2P15880 293 aaKnown RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 RCVRNP35243 200 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 GLIPR1P48060 266 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 TRAT1Q6PIZ9 186 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DUX4L9Q6RFH8 374 aaPredicted RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 TRAPPC6BQ86SZ2 158 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 BCL6BQ8N143 479 aaPredicted RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 TMEM229BQ8NBD8 167 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 LY6G5BQ8NDX9 201 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 TMEM185AQ8NFB2 350 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 C8orf46Q8TAG6 207 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 NUDCD2Q8WVJ2 157 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 GCDHQ92947 438 aaPredicted RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 CYYR1Q96J86 154 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DUX4Q9UBX2 424 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 CLN8Q9UBY8 286 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 MEIKINA0A087WXM9 373 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 KIR2DS1A0A191URI9 304 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 hADV38S2A0JD32 116 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 ANKRD20A5PA0PJZ0 165 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 A8MXK9 166 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 TRDCB7Z8K6 153 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 J3QRK9 145 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 LANCL1O43813 399 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 HEXAP06865 529 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 CTXN2P0C2S0 81 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 IL7P13232 177 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 RCC1P18754 421 aaPredicted RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 TBPP20226 339 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 KIR2DS4P43632 304 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 AP3S2P59780 193 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 RPL31P62899 125 aaKnown RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 MADCAM1Q13477 382 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 DYRK1AQ13627 763 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 KIR2DS1Q14954 304 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 ATXN7L3Q14CW9 347 aaPredicted RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 C19orf54Q5BKX5 351 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 C6orf183Q5T699 404 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 Q6ZPA2 131 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 KRTAP1-3Q8IUG1 177 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 GVQW1Q8N7I0 195 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 BEST4Q8NFU0 473 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 CLDND2Q8NHS1 167 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 SNAPC3Q92966 411 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 RAB39BQ96DA2 213 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 HDHD3Q9BSH5 251 aaPredicted RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 DCTN5Q9BTE1 182 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 ST6GALNAC5Q9BVH7 336 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 TAS2R3Q9NYW6 316 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 KIF25Q9UIL4 384 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 ANXA10Q9UJ72 324 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 TRAPPC2LQ9UL33 140 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 UBE2J1Q9Y385 318 aaPredicted RBP6.61□□□□□ -1.35
COPS3-215ENST00000578317 LINC00312Q9Y6C7 94 aa6.61□□□□□ -1.35
COPS3-215ENST00000578317 ANKRD17O75179 2603 aaKnown RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 CCDC168Q8NDH2 2452 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 A0A096LNT2 108 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 TRGV10A0A0A0MS01 117 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 PPIAL4CA0A0B4J2A2 164 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 IGHV4-61A0A0C4DH41 118 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 KBTBD11-OT1A0A1B0GTJ5 212 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 NPIPB11E5RHQ5 1161 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 C15orf65H3BRN8 121 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 FOXH1O75593 365 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 CD74P04233 296 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 LIPFP07098 398 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 CSF1P09603 554 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 NDUFB7P17568 137 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 USF1P22415 310 aaPredicted RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 EDDM3BP56851 147 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 TAS2R19P59542 299 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 GNB2P62879 340 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 SRSF3P84103 164 aaKnown RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 IFITM3Q01628 133 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 LOXL1Q08397 574 aaPredicted RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 DCTN2Q13561 401 aaKnown RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 KLF9Q13886 244 aaPredicted RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 ACTBL2Q562R1 376 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 ESCO2Q56NI9 601 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 VAX1Q5SQQ9 334 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 TRIQKQ629K1 86 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 C1orf122Q6ZSJ8 110 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 BTN2A1Q7KYR7 527 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 TOMM5Q8N4H5 51 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 OR10A7Q8NGE5 316 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 OR5AP2Q8NGF4 316 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 OR4K15Q8NH41 348 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 ZFAND2BQ8WV99 257 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 RAB24Q969Q5 203 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 SSBP3Q9BWW4 388 aaPredicted RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 ZNF286AQ9HBT8 521 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 CHMP1AQ9HD42 196 aaPredicted RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 RAB9BQ9NP90 201 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 IFT46Q9NQC8 304 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 KCNIP1Q9NZI2 227 aa6.6□□□□□ -1.35
COPS3-215ENST00000578317 ZNF230Q9UIE0 474 aaPredicted RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 RPUSD1Q9UJJ7 312 aaKnown RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 CHD3Q12873 2000 aaKnown RBP6.6□□□□□ -1.35
COPS3-215ENST00000578317 LOC105371242A0A075B767 164 aa6.59□□□□□ -1.35
COPS3-215ENST00000578317 A0A1W2PPH5 198 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms