RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 TMEM95Q3KNT9 176 aa18.31■□□□□ 0.52
VAPA-205ENST00000578314 Q3ZCU0 254 aa18.31■□□□□ 0.52
VAPA-205ENST00000578314 LIPKQ5VXJ0 399 aa18.31■□□□□ 0.52
VAPA-205ENST00000578314 DRAM1Q8N682 238 aa18.31■□□□□ 0.52
VAPA-205ENST00000578314 TRAPPC2LQ9UL33 140 aa18.31■□□□□ 0.52
VAPA-205ENST00000578314 TET2Q6N021 2002 aaPredicted RBP18.3■□□□□ 0.52
VAPA-205ENST00000578314 PRKDCP78527 4128 aaKnown RBP18.3■□□□□ 0.52
VAPA-205ENST00000578314 A0A1W2PPE3 182 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 C12orf77C9JDV5 145 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 HSPA13P48723 471 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 EMX1Q04741 257 aaPredicted RBP18.3■□□□□ 0.52
VAPA-205ENST00000578314 ABCA11PQ4W5N1 156 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 HSD17B12Q53GQ0 312 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 RBM48Q5RL73 367 aaKnown RBP18.3■□□□□ 0.52
VAPA-205ENST00000578314 C6orf183Q5T699 404 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 PRSS48Q7RTY5 328 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 OR56B4Q8NH76 319 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 UBALD1Q8TB05 177 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 FAM46BQ96A09 425 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 RAB9BQ9NP90 201 aa18.3■□□□□ 0.52
VAPA-205ENST00000578314 ERICH4A6NGS2 130 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 SPINT2O43291 252 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 PDCD6O75340 191 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 OPN1MWP04001 364 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 SNRNP70P08621 437 aaKnown RBP18.29■□□□□ 0.52
VAPA-205ENST00000578314 OPN1MW2P0DN77 364 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 OPN1MW3P0DN78 364 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 VSIG8P0DPA2 414 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 ZNF816Q0VGE8 651 aaPredicted RBP18.29■□□□□ 0.52
VAPA-205ENST00000578314 TMEM30BQ3MIR4 351 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 TRAT1Q6PIZ9 186 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 IZUMO2Q6UXV1 221 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 TMEM91Q6ZNR0 172 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 NDUFA11Q86Y39 141 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 OR4K15Q8NH41 348 aa18.29■□□□□ 0.52
VAPA-205ENST00000578314 CITED2Q99967 270 aaPredicted RBP18.29■□□□□ 0.52
VAPA-205ENST00000578314 UBE2QL1A1L167 161 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 ADARB2-AS1A8MUL3 147 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 HSD17B6O14756 317 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 MPIG6BO95866 241 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 GAPDHP04406 335 aaKnown RBP18.28■□□□□ 0.52
VAPA-205ENST00000578314 LPLP06858 475 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 RCC1P18754 421 aaPredicted RBP18.28■□□□□ 0.52
VAPA-205ENST00000578314 FAM53AQ6NSI3 398 aaPredicted RBP18.28■□□□□ 0.52
VAPA-205ENST00000578314 OR5AU1Q8NGC0 362 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 TMEM203Q969S6 136 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 ST6GALNAC6Q969X2 333 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 MBNL3Q9NUK0 354 aaKnown RBP18.28■□□□□ 0.52
VAPA-205ENST00000578314 MOB4Q9Y3A3 225 aa18.28■□□□□ 0.52
VAPA-205ENST00000578314 IGHV3-43A0A0B4J1X8 118 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 CCRL2O00421 344 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 SLC22A1O15245 554 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 HBZP02008 142 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 HSMCR30P0CW71 290 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 IGHV3-43DP0DP04 118 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 CPEP16870 476 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 RPS27AP62979 156 aaKnown RBP18.27■□□□□ 0.52
VAPA-205ENST00000578314 CD83Q01151 205 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 MLLT11Q13015 90 aaPredicted RBP18.27■□□□□ 0.52
VAPA-205ENST00000578314 EBI3Q14213 229 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 TRAM1Q15629 374 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 NSUN5P1Q3KNT7 163 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 ZNF554Q86TJ5 538 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 LYG1Q8N1E2 194 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 KCNG3Q8TAE7 436 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 CYYR1Q96J86 154 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 CCDC90BQ9GZT6 254 aa18.27■□□□□ 0.52
VAPA-205ENST00000578314 IGHV1-3A0A0C4DH29 117 aa18.26■□□□□ 0.51
VAPA-205ENST00000578314 SH2D7A6NKC9 451 aaPredicted RBP18.26■□□□□ 0.51
VAPA-205ENST00000578314 TMEM11P17152 192 aa18.26■□□□□ 0.51
VAPA-205ENST00000578314 PSMA1P25786 263 aaKnown RBP18.26■□□□□ 0.51
VAPA-205ENST00000578314 HTR2CP28335 458 aa18.26■□□□□ 0.51
VAPA-205ENST00000578314 QRFPP83859 136 aa18.26■□□□□ 0.51
VAPA-205ENST00000578314 OR10K2Q6IF99 312 aa18.26■□□□□ 0.51
VAPA-205ENST00000578314 SLC25A48Q6ZT89 311 aaKnown RBP18.26■□□□□ 0.51
VAPA-205ENST00000578314 CENPVQ7Z7K6 275 aaPredicted RBP18.26■□□□□ 0.51
VAPA-205ENST00000578314 ZNF439Q8NDP4 499 aa18.26■□□□□ 0.51
VAPA-205ENST00000578314 OR1L1Q8NH94 360 aa18.26■□□□□ 0.51
VAPA-205ENST00000578314 MGLLQ99685 303 aa18.26■□□□□ 0.51
VAPA-205ENST00000578314 TMEM14DPA8MWL7 114 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 IGKV1D-33P01593 117 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 IGKV1-33P01594 117 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 IL3RAP26951 378 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 CHATP28329 748 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 ZNF134P52741 427 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 RPS25P62851 125 aaKnown RBP18.25■□□□□ 0.51
VAPA-205ENST00000578314 UNC119Q13432 240 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 HES1Q14469 280 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 STEAP3Q658P3 488 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 OR6M1Q8NGM8 313 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 MRPL30Q8TCC3 161 aaKnown RBP18.25■□□□□ 0.51
VAPA-205ENST00000578314 NEDD4LQ96PU5 975 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 TM2D1Q9BX74 207 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 TMEM59Q9BXS4 323 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 TAF9BQ9HBM6 251 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 GNG12Q9UBI6 72 aa18.25■□□□□ 0.51
VAPA-205ENST00000578314 SLC31A2O15432 143 aa18.24■□□□□ 0.51
VAPA-205ENST00000578314 FGF16O43320 207 aa18.24■□□□□ 0.51
VAPA-205ENST00000578314 BPNT1O95861 308 aa18.24■□□□□ 0.51
VAPA-205ENST00000578314 MAP2K4P45985 399 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms