RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CARFQ8N187 725 aa11.73□□□□□ -0.53
NDEL1-204ENST00000578172 COLQQ9Y215 455 aaPredicted RBP11.73□□□□□ -0.53
NDEL1-204ENST00000578172 TOX3O15405 576 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-204ENST00000578172 TMEM252Q8N6L7 170 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 SPIN2AQ99865 258 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 SPIN2BQ9BPZ2 258 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 STRADBQ9C0K7 418 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 MTCH1Q9NZJ7 389 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 FOXJ2Q9P0K8 574 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 ZFHX4Q86UP3 3567 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 WNK2Q9Y3S1 2297 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 UBE2L5PA0A1B0GUS4 154 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 A0A1W2PPQ1 181 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 NPIPB13A6NJU9 1138 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 NPIPB4C9JG80 1138 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 SAT2Q96F10 170 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-204ENST00000578172 CDH20Q9HBT6 801 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 ZNF503-AS2A6NEH8 195 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 KIAA1324LA8MWY0 1029 aaPredicted RBP11.72□□□□□ -0.53
NDEL1-204ENST00000578172 CACFD1Q9UGQ2 172 aa11.72□□□□□ -0.53
NDEL1-204ENST00000578172 CLN5O75503 358 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 CELA3BP08861 270 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 CST2P09228 141 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 FGF5P12034 268 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 RPL29P47914 159 aaKnown RBP11.71□□□□□ -0.53
NDEL1-204ENST00000578172 TGFBR3Q03167 851 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 C10orf128Q5T292 105 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 RTL6Q6ICC9 239 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 ZNF665Q9H7R5 613 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 SH3BGRL2Q9UJC5 107 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 TINAGQ9UJW2 476 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 IL2RGP31785 369 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 SLC25A53Q5H9E4 307 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 PCED1AQ9H1Q7 454 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 WSB1Q9Y6I7 421 aa11.71□□□□□ -0.53
NDEL1-204ENST00000578172 DCHS1Q96JQ0 3298 aa11.71□□□□□ -0.54
NDEL1-204ENST00000578172 hCG_38984A0A1B0GV85 526 aa11.71□□□□□ -0.54
NDEL1-204ENST00000578172 ZNF266Q14584 549 aa11.71□□□□□ -0.54
NDEL1-204ENST00000578172 ZNF429Q86V71 674 aa11.71□□□□□ -0.54
NDEL1-204ENST00000578172 OR2J1Q9GZK6 312 aa11.71□□□□□ -0.54
NDEL1-204ENST00000578172 SLC35B3Q9H1N7 401 aa11.71□□□□□ -0.54
NDEL1-204ENST00000578172 LAMP3Q9UQV4 416 aa11.71□□□□□ -0.54
NDEL1-204ENST00000578172 ATG2AQ2TAZ0 1938 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 ZNF716A6NP11 495 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 TCAPO15273 167 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 MBP02144 154 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 CCL1P22362 96 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 SNCAP37840 140 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 P2RY1P47900 373 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 CASP6P55212 293 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 HIST3H3Q16695 136 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 ZNF880Q6PDB4 577 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 C20orf204Q6ZNR8 217 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 GGNQ86UU5 652 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 DEFB123Q8N688 67 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 SMIM8Q96KF7 97 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 TMEM204Q9BSN7 226 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 GGACTQ9BVM4 153 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 SLC25A31Q9H0C2 315 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 SLC25A22Q9H936 323 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 MSL2Q9HCI7 577 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 FOXD3Q9UJU5 478 aaPredicted RBP11.7□□□□□ -0.54
NDEL1-204ENST00000578172 TNFSF15O95150 251 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 Q3ZCU0 254 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 DHRS7BQ6IAN0 325 aaPredicted RBP11.7□□□□□ -0.54
NDEL1-204ENST00000578172 BTNL8Q6UX41 500 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 TM2D1Q9BX74 207 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 PARP11Q9NR21 331 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 LRRC3CA6NJW4 275 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 SLC22A20A6NK97 555 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 NUDT19A8MXV4 375 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 HOXC12P31275 282 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 CEACAM6P40199 344 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 UBE2G2P60604 165 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 SURF2Q15527 256 aaPredicted RBP11.7□□□□□ -0.54
NDEL1-204ENST00000578172 CRIP3Q6Q6R5 217 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 TMEM171Q8WVE6 324 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 CLDN23Q96B33 292 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 ZDHHC8Q9ULC8 765 aa11.7□□□□□ -0.54
NDEL1-204ENST00000578172 H3BQ15 152 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 C1orf87Q8N0U7 546 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 FAM58AQ8N1B3 248 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 TMEM251Q8N6I4 163 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 OR2M7Q8NG81 312 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 M1APQ8TC57 530 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 GLRX2Q9NS18 164 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 PSENENQ9NZ42 101 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 TMED3Q9Y3Q3 217 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 RBFOX3A6NFN3 312 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 TRGC2P03986 189 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 CRYGSP22914 178 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 RND3P61587 244 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 FAM185AQ8N0U4 392 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 DEFB108BQ8NET1 73 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 NINJ1Q92982 152 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 MOB3AQ96BX8 217 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 MSI2Q96DH6 328 aaKnown RBP11.69□□□□□ -0.54
NDEL1-204ENST00000578172 OPA3Q9H6K4 179 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 PLEKHF2Q9H8W4 249 aa11.69□□□□□ -0.54
NDEL1-204ENST00000578172 TECTAO75443 2155 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms