RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 S100A6P06703 90 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 DVL1P1P54792 670 aaPredicted RBP4.58□□□□□ -1.68
VAPA-203ENST00000577539 SOX8P57073 446 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 PMP22Q01453 160 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 OR1C1Q15619 314 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 TBR1Q16650 682 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 GUK1Q16774 197 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 KHDC1LQ5JSQ8 128 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 AVPI1Q5T686 147 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 RIPPLY2Q5TAB7 128 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 NSUN5P2Q63ZY6 315 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 ABLIM2Q6H8Q1 611 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 P4HA3Q7Z4N8 544 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 TBC1D26Q86UD7 250 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 ZDHHC23Q8IYP9 409 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 C17orf78Q8N4C9 275 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 OR2M7Q8NG81 312 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 PSMF1Q92530 271 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 MOB3AQ96BX8 217 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 CITED2Q99967 270 aaPredicted RBP4.58□□□□□ -1.68
VAPA-203ENST00000577539 ZNF391Q9UJN7 358 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 CARHSP1Q9Y2V2 147 aaKnown RBP4.58□□□□□ -1.68
VAPA-203ENST00000577539 CEP250Q9BV73 2442 aa4.58□□□□□ -1.68
VAPA-203ENST00000577539 CACNA1HO95180 2353 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 KIAA2026Q5HYC2 2103 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 DIDO1Q9BTC0 2240 aaKnown RBP4.57□□□□□ -1.68
VAPA-203ENST00000577539 ANKRD30BLA7E2S9 258 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 SYNGR1O43759 233 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CYTIPO60759 359 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 GAPDHP04406 335 aaKnown RBP4.57□□□□□ -1.68
VAPA-203ENST00000577539 KCNJ3P48549 501 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 SHEQ5VZ18 495 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 GAPTQ8N292 157 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 OR2G3Q8NGZ4 309 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 RXFP4Q8TDU9 374 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 ISOC2Q96AB3 205 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 FAM173AQ9BQD7 235 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 DEFB127Q9H1M4 99 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 WFDC1Q9HC57 220 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 KCNJ16Q9NPI9 418 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 PARP11Q9NR21 331 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CCL28Q9NRJ3 127 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 C19orf12Q9NSK7 152 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 PUS1Q9Y606 427 aaKnown RBP eCLIP4.57□□□□□ -1.68
VAPA-203ENST00000577539 RFNGQ9Y644 331 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 MED13Q9UHV7 2174 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 A0A1W2PR80 420 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CDRT15L2A8MXV6 281 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 H7C1Q1 480 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 MMP7P09237 267 aaPredicted RBP4.57□□□□□ -1.68
VAPA-203ENST00000577539 SPP1P10451 314 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CBR1P16152 277 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 APLNRP35414 380 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 OR8B8Q15620 311 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CXorf66Q5JRM2 361 aaPredicted RBP4.57□□□□□ -1.68
VAPA-203ENST00000577539 TMEM42Q69YG0 159 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 TMEM211Q6ICI0 200 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 OR2T2Q6IF00 324 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 BTNL8Q6UX41 500 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CMTM1Q8IZ96 169 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 ZFP62Q8NB50 900 aaPredicted RBP4.57□□□□□ -1.68
VAPA-203ENST00000577539 APOBEC3DQ96AK3 386 aaPredicted RBP4.57□□□□□ -1.68
VAPA-203ENST00000577539 MSI2Q96DH6 328 aaKnown RBP4.57□□□□□ -1.68
VAPA-203ENST00000577539 GALNT14Q96FL9 552 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 ADGRG7Q96K78 797 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 SPIN2AQ99865 258 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 SPIN2BQ9BPZ2 258 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 SMCO4Q9NRQ5 59 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 TMED3Q9Y3Q3 217 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 DOCK10Q96BY6 2186 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CD300LBA8K4G0 201 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 RPL36A-HNRNPH2H7BZ11 118 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 S100GP29377 79 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 ZXDAP98168 799 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 EWSR1Q01844 656 aaKnown RBP eCLIP4.57□□□□□ -1.68
VAPA-203ENST00000577539 TGIF1Q15583 401 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 HIKESHIQ53FT3 197 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 GPR157Q5UAW9 335 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 DHRS7BQ6IAN0 325 aaPredicted RBP4.57□□□□□ -1.68
VAPA-203ENST00000577539 UBAC2Q8NBM4 344 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CLCC1Q96S66 551 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 BIN3Q9NQY0 253 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 FOXJ2Q9P0K8 574 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 KCNS2Q9ULS6 477 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 KPTNQ9Y664 436 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 CACNA1GO43497 2377 aa4.57□□□□□ -1.68
VAPA-203ENST00000577539 TTC28Q96AY4 2481 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 UMAD1C9J7I0 102 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 SERPINE2P07093 398 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 CA6P23280 308 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 PPP1CCP36873 323 aaKnown RBP4.56□□□□□ -1.68
VAPA-203ENST00000577539 MPLP40238 635 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 GATA4P43694 442 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 P2RY1P47900 373 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 RAB13P51153 203 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 RAB5BP61020 215 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 HNF4GQ14541 408 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 IL13RA2Q14627 380 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 IZUMO4Q1ZYL8 232 aa4.56□□□□□ -1.68
VAPA-203ENST00000577539 CLEC2AQ6UVW9 174 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms