RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 MPIG6BO95866 241 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 IGHV3-43DP0DP04 118 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 HNF4GQ14541 408 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 INSL4Q14641 139 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 TMEM30BQ3MIR4 351 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 HSD17B12Q53GQ0 312 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 KHDC1LQ5JSQ8 128 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 NKAPLQ5M9Q1 402 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 LIPKQ5VXJ0 399 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 TMEM104Q8NE00 496 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 OR4X2Q8NGF9 303 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 OR4K15Q8NH41 348 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 NRG4Q8WWG1 115 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 PHYHIPQ92561 330 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 OCSTAMPQ9BR26 566 aa12.38□□□□□ -0.43
SF3B3-215ENST00000577085 A0A1W2PPI3 338 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 TCRBV4S1A1TA0A5B7 111 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 UBE2QL1A1L167 161 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 SH2D7A6NKC9 451 aaPredicted RBP12.37□□□□□ -0.43
SF3B3-215ENST00000577085 C15orf65H3BRN8 121 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 IGKV1D-33P01593 117 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 IGKV1-33P01594 117 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 GLAP06280 429 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 PF4V1P10720 104 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 SRMP19623 302 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 VHLP40337 213 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 REG1BP48304 166 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 HSPA13P48723 471 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 FAM27D1Q5T7N8 215 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 TMEM203Q969S6 136 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 Q96M66 194 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 NEDD4LQ96PU5 975 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 GFOD1Q9NXC2 390 aa12.37□□□□□ -0.43
SF3B3-215ENST00000577085 C12orf77C9JDV5 145 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 PDCD6O75340 191 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 MYF6P23409 242 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 SLC35A2P78381 396 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 ZNF816Q0VGE8 651 aaPredicted RBP12.36□□□□□ -0.43
SF3B3-215ENST00000577085 DIAPH2-AS1Q14236 149 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 UNQ9370/PRO34162Q6UXP9 181 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 C8orf31Q8N9H6 132 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 ANKRD60Q9BZ19 345 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 OR2S2Q9NQN1 319 aa12.36□□□□□ -0.43
SF3B3-215ENST00000577085 LSM2Q9Y333 95 aaKnown RBP12.36□□□□□ -0.43
SF3B3-215ENST00000577085 IGHV1-3A0A0C4DH29 117 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 FAM90A9PA6NNJ1 464 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 NCBP2LA6PVI3 153 aaKnown RBP12.35□□□□□ -0.43
SF3B3-215ENST00000577085 HBZP02008 142 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 PSMA1P25786 263 aaKnown RBP12.35□□□□□ -0.43
SF3B3-215ENST00000577085 HTR2CP28335 458 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 LOXL3P58215 753 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 TRAM1Q15629 374 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 Q3ZCU0 254 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 FBLN7Q53RD9 439 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 IZUMO2Q6UXV1 221 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 LINC00311Q8N616 119 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 OR10V1Q8NGI7 309 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 KCNG3Q8TAE7 436 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 WIPF2Q8TF74 440 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-215ENST00000577085 SGCDQ92629 289 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 TMEM59Q9BXS4 323 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 PLGRKTQ9HBL7 147 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 TAF9BQ9HBM6 251 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 CHMP1AQ9HD42 196 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-215ENST00000577085 BLOC1S6Q9UL45 172 aa12.35□□□□□ -0.43
SF3B3-215ENST00000577085 TSSC4Q9Y5U2 329 aaPredicted RBP12.35□□□□□ -0.43
SF3B3-215ENST00000577085 IGHV3-72A0A0B4J1Y9 119 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 TXNL1O43396 289 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 SC5DO75845 299 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 ARL6IP5O75915 188 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 AMY1AP04745 511 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 AMY2AP04746 511 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 RCC1P18754 421 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-215ENST00000577085 LRRTM1Q86UE6 522 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 LYPD6Q86Y78 171 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 TGIF2LXQ8IUE1 241 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 C5orf56Q8N8D9 126 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 OR6M1Q8NGM8 313 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 OR2T10Q8NGZ9 312 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 OR1L1Q8NH94 360 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 RTN4IP1Q8WWV3 396 aaPredicted RBP12.34□□□□□ -0.43
SF3B3-215ENST00000577085 CNBD2Q96M20 576 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 DUSP21Q9H596 190 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 ABRACLQ9P1F3 81 aa12.34□□□□□ -0.43
SF3B3-215ENST00000577085 PSMB11A5LHX3 300 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 SERPINE3A8MV23 424 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 G3V4G9 280 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 FGF16O43320 207 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 PF4P02776 101 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 UCHL1P09936 223 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 VSIG8P0DPA2 414 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 RPS27AP62979 156 aaKnown RBP12.33□□□□□ -0.44
SF3B3-215ENST00000577085 SLC35B1P78383 322 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 CD83Q01151 205 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 IRF3Q14653 427 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 C1orf100Q5SVJ3 147 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 OR10K2Q6IF99 312 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 PRSS48Q7RTY5 328 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 FOXRED2Q8IWF2 684 aa12.33□□□□□ -0.44
SF3B3-215ENST00000577085 GALMQ96C23 342 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms