RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 PIGYQ3MUY2 71 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 TP53I3Q53FA7 332 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 FAHD1Q6P587 224 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 SUMF2Q8NBJ7 301 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR13C3Q8NGS6 347 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 IL4I1Q96RQ9 567 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 DPCDQ9BVM2 203 aaPredicted RBP12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 PLEKHA3Q9HB20 300 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 ARL8BQ9NVJ2 186 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 NDE1Q9NXR1 346 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 ZNF581Q9P0T4 197 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 TAGLN3Q9UI15 199 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 FBXO7Q9Y3I1 522 aa12.41□□□□□ -0.42
CTDNEP1-211ENST00000575783 CXorf65A6NEN9 183 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 ARPC1BO15143 372 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 NBR2O15453 112 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 CSTBP04080 98 aaKnown RBP12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 ZNF134P52741 427 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 PAX5Q02548 391 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 RAB40BQ12829 278 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 PMS2P11Q13670 270 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 C5orf64Q2M2E5 130 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 CT45A1Q5HYN5 189 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR10V1Q8NGI7 309 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR51A4Q8NGJ6 313 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 OR2G2Q8NGZ5 317 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 CT45A3Q8NHU0 189 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 PRRG3Q9BZD7 231 aa12.4□□□□□ -0.42
CTDNEP1-211ENST00000575783 TMEM30CPA0ZSE6 113 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 ATP6V1E1P36543 226 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 TPPP2P59282 170 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 NDPQ00604 133 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 TRIM25Q14258 630 aaKnown RBP12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 IL13RA2Q14627 380 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 LRRC36Q1X8D7 754 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 C19orf54Q5BKX5 351 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 ELP2Q6IA86 826 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 LINC00322Q6ZN03 302 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 FAM220AQ7Z4H9 259 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 OR10K1Q8NGX5 313 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 ABHD5Q8WTS1 349 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 GATAD1Q8WUU5 269 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 RHOVQ96L33 236 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 LRGUKQ96M69 825 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 THAP7Q9BT49 309 aaPredicted RBP12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 CST11Q9H112 138 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 FRRS1LQ9P0K9 344 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 GNG12Q9UBI6 72 aa12.39□□□□□ -0.43
CTDNEP1-211ENST00000575783 SHISA3A0PJX4 238 aa12.38□□□□□ -0.43
CTDNEP1-211ENST00000575783 ZNF137PP52743 207 aa12.38□□□□□ -0.43
CTDNEP1-211ENST00000575783 ZNF691Q5VV52 312 aa12.38□□□□□ -0.43
CTDNEP1-211ENST00000575783 LPCAT4Q643R3 524 aa12.38□□□□□ -0.43
CTDNEP1-211ENST00000575783 GID4Q8IVV7 300 aa12.38□□□□□ -0.43
CTDNEP1-211ENST00000575783 ZNF439Q8NDP4 499 aa12.38□□□□□ -0.43
CTDNEP1-211ENST00000575783 IZUMO1RA6ND01 250 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 LANCL1O43813 399 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 ORC5O43913 435 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 CNIH1O95406 144 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 ISG15P05161 165 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 EFNB1P98172 346 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 TMEM267Q0VDI3 215 aaPredicted RBP12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 RSU1Q15404 277 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 LCN12Q6JVE5 192 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 PYHIN1Q6K0P9 492 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 IL34Q6ZMJ4 242 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 ADGRG5Q8IZF4 528 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 PRR18Q8N4B5 295 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 TCTEX1D1Q8N7M0 179 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 OR9G4Q8NGQ1 327 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 FAM107BQ9H098 131 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 RANGRFQ9HD47 186 aaPredicted RBP12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 WARS2Q9UGM6 360 aaKnown RBP12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 NUBP2Q9Y5Y2 271 aa12.37□□□□□ -0.43
CTDNEP1-211ENST00000575783 ANKRD34BA5PLL1 514 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 DEDDO75618 318 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 OR7C1O76099 320 aaPredicted RBP12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 HTR3BO95264 441 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 FAM107AO95990 144 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 EGR2P11161 476 aaPredicted RBP12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 ZP3P21754 424 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 CD40LGP29965 261 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 CD81P60033 236 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 NANOS3P60323 173 aaKnown RBP12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 CX3CL1P78423 397 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 Q3ZCU0 254 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 ACTBL2Q562R1 376 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 ZNF660Q6AZW8 331 aaPredicted RBP12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 NEK7Q8TDX7 302 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 TNFAIP8L1Q8WVP5 186 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 RGP1Q92546 391 aaPredicted RBP12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 GPER1Q99527 375 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 FAM192AQ9GZU8 254 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 ETAA1Q9NY74 926 aa12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 CNOT2Q9NZN8 540 aaKnown RBP12.36□□□□□ -0.43
CTDNEP1-211ENST00000575783 SPINT2O43291 252 aa12.35□□□□□ -0.43
CTDNEP1-211ENST00000575783 TPPPO94811 219 aa12.35□□□□□ -0.43
CTDNEP1-211ENST00000575783 TRGV3P03979 118 aa12.35□□□□□ -0.43
CTDNEP1-211ENST00000575783 CRIP2P52943 208 aaPredicted RBP12.35□□□□□ -0.43
CTDNEP1-211ENST00000575783 SYNJ2BPP57105 145 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms