RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 COPS3Q9UNS2 423 aa4.55□□□□□ -1.68
SMG6-219ENST00000575663 CEPT1Q9Y6K0 416 aa4.55□□□□□ -1.68
SMG6-219ENST00000575663 DNAH6Q9C0G6 4158 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 TMEM269A0A1B0GVZ9 245 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 EFCAB10A6NFE3 127 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 ZNF729A6NN14 1252 aaPredicted RBP4.54□□□□□ -1.68
SMG6-219ENST00000575663 H0Y980 276 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 H3BN98 237 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 ZNF701M0R085 212 aaPredicted RBP4.54□□□□□ -1.68
SMG6-219ENST00000575663 HSD17B6O14756 317 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 CYB5AP00167 134 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 IGHA1P01876 353 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 IGF1P05019 195 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 GNAO1P09471 354 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 MED14OSP0DP75 135 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 CRHBPP24387 322 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 SLURP1P55000 103 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 HTD2P86397 168 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 PMS2P11Q13670 270 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 APOFQ13790 326 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 ZNF674Q2M3X9 581 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 ZNF829Q3KNS6 432 aaPredicted RBP4.54□□□□□ -1.68
SMG6-219ENST00000575663 SPIN3Q5JUX0 258 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 LINC01590Q5TEZ4 76 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 C12orf73Q69YU5 71 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 ZNF773Q6PK81 442 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 IDO2Q6ZQW0 420 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 PRSS48Q7RTY5 328 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 HAPLN4Q86UW8 402 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 IZUMO1Q8IYV9 350 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 HS3ST5Q8IZT8 346 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 SVOPQ8N4V2 548 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 Q8N9W7 124 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 SLC24A4Q8NFF2 622 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 TSPAN14Q8NG11 270 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 OR9Q2Q8NGE9 314 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 OR52N4Q8NGI2 321 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 OR10X1Q8NGY0 326 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 OR2T10Q8NGZ9 312 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 OR51E1Q8TCB6 317 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 HAVCR2Q8TDQ0 301 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 CORO2AQ92828 525 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 SLAMF9Q96A28 289 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 OTULINQ96BN8 352 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 NIPSNAP1Q9BPW8 284 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 NMNAT2Q9BZQ4 307 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 HIPK2Q9H2X6 1198 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 RIBC2Q9H4K1 309 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 MOB1AQ9H8S9 216 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 PLEKHA1Q9HB21 404 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 SEBOXQ9HB31 216 aaPredicted RBP4.54□□□□□ -1.68
SMG6-219ENST00000575663 EXOSC4Q9NPD3 245 aaKnown RBP4.54□□□□□ -1.68
SMG6-219ENST00000575663 DIABLOQ9NR28 239 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 OR6C3Q9NZP0 311 aa4.54□□□□□ -1.68
SMG6-219ENST00000575663 RPL36Q9Y3U8 105 aaKnown RBP4.54□□□□□ -1.68
SMG6-219ENST00000575663 VPS13DQ5THJ4 4388 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 PKHD1P08F94 4074 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 FAM230AA0A1W2PPH8 454 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 SHISA3A0PJX4 238 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 ODAMA1E959 279 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 PCP4L1A6NKN8 68 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 J3QR06 171 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 SIRPB1O00241 398 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 ARPC1BO15143 372 aaKnown RBP4.53□□□□□ -1.68
SMG6-219ENST00000575663 SHOXO15266 292 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 PRODHO43272 600 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 MITFO75030 526 aaPredicted RBP4.53□□□□□ -1.68
SMG6-219ENST00000575663 DEDDO75618 318 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 IGLV1-51P01701 117 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 IGLV3-1P01715 115 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 LGALS1P09382 135 aaKnown RBP4.53□□□□□ -1.68
SMG6-219ENST00000575663 GABRB1P18505 474 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 FSTP19883 344 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 GALP22466 123 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 PTBP1P26599 531 aaKnown RBP eCLIP4.53□□□□□ -1.684e-7■■■■□ 26.4
SMG6-219ENST00000575663 POLR2IP36954 125 aaKnown RBP4.53□□□□□ -1.68
SMG6-219ENST00000575663 GDNFP39905 211 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 GLP1RP43220 463 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 OR3A1P47881 315 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 GNG10P50151 68 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 RAB4BP61018 213 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 ZNF816Q0VGE8 651 aaPredicted RBP4.53□□□□□ -1.68
SMG6-219ENST00000575663 RAB40BQ12829 278 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 PPP1R8Q12972 351 aaKnown RBP4.53□□□□□ -1.68
SMG6-219ENST00000575663 EBI3Q14213 229 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 GINS1Q14691 196 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 ODF1Q14990 250 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 ZNF146Q15072 292 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 ZIK1Q3SY52 487 aaPredicted RBP4.53□□□□□ -1.68
SMG6-219ENST00000575663 TM4SF20Q53R12 229 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 FAM209BQ5JX69 171 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 NXNL2Q5VZ03 156 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 TMEM42Q69YG0 159 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 LCN12Q6JVE5 192 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 FDX2Q6P4F2 183 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 SLC25A26Q70HW3 274 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 MOB3BQ86TA1 216 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 ANGPTL5Q86XS5 388 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 GID4Q8IVV7 300 aa4.53□□□□□ -1.68
SMG6-219ENST00000575663 TMEM163Q8TC26 289 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms