RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 RBMS3Q6XE24 437 aaKnown RBP13.23□□□□□ -0.29
PFN1-203ENST00000574872 LHFPL4Q7Z7J7 247 aa13.23□□□□□ -0.29
PFN1-203ENST00000574872 IZUMO1Q8IYV9 350 aa13.23□□□□□ -0.29
PFN1-203ENST00000574872 OR11H6Q8NGC7 330 aa13.23□□□□□ -0.29
PFN1-203ENST00000574872 ZDHHC16Q969W1 377 aa13.23□□□□□ -0.29
PFN1-203ENST00000574872 PHF21AQ96BD5 680 aa13.23□□□□□ -0.29
PFN1-203ENST00000574872 KCTD12Q96CX2 325 aaKnown RBP13.23□□□□□ -0.29
PFN1-203ENST00000574872 BCL7BQ9BQE9 202 aa13.23□□□□□ -0.29
PFN1-203ENST00000574872 MBNL3Q9NUK0 354 aaKnown RBP13.23□□□□□ -0.29
PFN1-203ENST00000574872 ZNRD1Q9P1U0 126 aa13.23□□□□□ -0.29
PFN1-203ENST00000574872 FAM96BQ9Y3D0 163 aa13.23□□□□□ -0.29
PFN1-203ENST00000574872 TRAV18A0A075B6X5 111 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 TMEM235A6NFC5 223 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 ODF3BA8MYP8 253 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 TCF21O43680 179 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 SCGNO76038 276 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 ZNF182P17025 639 aaPredicted RBP13.22□□□□□ -0.29
PFN1-203ENST00000574872 GNG10P50151 68 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 LGALS4P56470 323 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 ARFRP1Q13795 201 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 MIDNQ504T8 468 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 ZNF626Q68DY1 528 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 TRAT1Q6PIZ9 186 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 OR10V1Q8NGI7 309 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 DUX5Q96PT3 197 aa13.22□□□□□ -0.29
PFN1-203ENST00000574872 RIMS4Q9H426 269 aaPredicted RBP13.22□□□□□ -0.29
PFN1-203ENST00000574872 A0A1W2PPE3 182 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 SERPINE3A8MV23 424 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 HPGDSO60760 199 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 VENTXO95231 258 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 EIF4EP06730 217 aaKnown RBP13.21□□□□□ -0.29
PFN1-203ENST00000574872 PLA1AQ53H76 456 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 ZNF880Q6PDB4 577 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 MOB1BQ7L9L4 216 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 NUDCD2Q8WVJ2 157 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 MAFIPQ8WZ33 124 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 AP3S1Q92572 193 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 AJUBAQ96IF1 538 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 RBM38Q9H0Z9 239 aaKnown RBP13.21□□□□□ -0.29
PFN1-203ENST00000574872 Q9N2K0 584 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 ESM1Q9NQ30 184 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 DIABLOQ9NR28 239 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 TNFRSF19Q9NS68 423 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 GFOD1Q9NXC2 390 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 GNG12Q9UBI6 72 aa13.21□□□□□ -0.29
PFN1-203ENST00000574872 ZNF230Q9UIE0 474 aaPredicted RBP13.21□□□□□ -0.29
PFN1-203ENST00000574872 A0A087X0M5 115 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 TRBV6-6A0A0A6YYG2 114 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 A0A1B0GX30 115 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 F2RL2O00254 374 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 TOR1AO14656 332 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 FCGR3AP08637 254 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 FBP1P09467 338 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 CD34P28906 385 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 SOX6P35712 828 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 TALDO1P37837 337 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 LOXL3P58215 753 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 HILS1P60008 231 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 BAMBIQ13145 260 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 MADCAM1Q13477 382 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 GNMTQ14749 295 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 HMGN3Q15651 99 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 TUSC1Q2TAM9 212 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 ZNF260Q3ZCT1 412 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 LDLRAD2Q5SZI1 272 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 OR10A7Q8NGE5 316 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 OR52L2PQ8NGH6 319 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 OR4P4Q8NGL7 312 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 DYNC2LI1Q8TCX1 351 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 IL1F10Q8WWZ1 152 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 ACOT12Q8WYK0 555 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 S100A16Q96FQ6 103 aaKnown RBP13.2□□□□□ -0.3
PFN1-203ENST00000574872 ABCG5Q9H222 651 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 RAB9BQ9NP90 201 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 PSG11Q9UQ72 335 aa13.2□□□□□ -0.3
PFN1-203ENST00000574872 HOXA3O43365 443 aaPredicted RBP13.19□□□□□ -0.3
PFN1-203ENST00000574872 MELTFP08582 738 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 GSTP1P09211 210 aaKnown RBP13.19□□□□□ -0.3
PFN1-203ENST00000574872 PTHLHP12272 177 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 GNG2P59768 71 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 HLA-DRB3P79483 266 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 ARL6IP1Q15041 203 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 HACD4Q5VWC8 232 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 MZT2AQ6P582 158 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 DYNAPQ8N1N2 210 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 OR9G1Q8NH87 305 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 ZNF596Q8TC21 504 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 GALMQ96C23 342 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 OR2S2Q9NQN1 319 aa13.19□□□□□ -0.3
PFN1-203ENST00000574872 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.19□□□□□ -0.3
PFN1-203ENST00000574872 RSL24D1Q9UHA3 163 aaKnown RBP13.19□□□□□ -0.3
PFN1-203ENST00000574872 TBL2Q9Y4P3 447 aaKnown RBP13.19□□□□□ -0.3
PFN1-203ENST00000574872 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
PFN1-203ENST00000574872 DNAJC9-AS1A6NH13 148 aa13.18□□□□□ -0.3
PFN1-203ENST00000574872 A6NJ64 397 aa13.18□□□□□ -0.3
PFN1-203ENST00000574872 J3QR06 171 aa13.18□□□□□ -0.3
PFN1-203ENST00000574872 IGLV1-47P01700 117 aa13.18□□□□□ -0.3
PFN1-203ENST00000574872 SCTP09683 121 aa13.18□□□□□ -0.3
PFN1-203ENST00000574872 ELK1P19419 428 aa13.18□□□□□ -0.3
PFN1-203ENST00000574872 HTR1DP28221 377 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms