RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 SPTA1P02549 2419 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 MPPED1O15442 326 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 NQO2P16083 231 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 HLA-DRB3P79483 266 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 PRAMEF6Q5VXH4 476 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 GAPTQ8N292 157 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 PLPPR1Q8TBJ4 325 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 MSI2Q96DH6 328 aaKnown RBP8.86□□□□□ -0.99
USP43-205ENST00000574408 TP53RKQ96S44 253 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 GLS2Q9UI32 602 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 WASF3Q9UPY6 502 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 TP53TG5Q9Y2B4 290 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 TRBV6-6A0A0A6YYG2 114 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 HSD17B6O14756 317 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 MED6O75586 246 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 TUSC2O75896 110 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 LYL1P12980 280 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 NPBWR1P48145 328 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 CEBPDP49716 269 aaPredicted RBP8.86□□□□□ -0.99
USP43-205ENST00000574408 ASCL1P50553 236 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 HOXA4Q00056 320 aaPredicted RBP8.86□□□□□ -0.99
USP43-205ENST00000574408 NAAAQ02083 359 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 EIF2S3LQ2VIR3 472 aaKnown RBP8.86□□□□□ -0.99
USP43-205ENST00000574408 KRTCAP3Q53RY4 240 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 SHEQ5VZ18 495 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 Q6ZR03 302 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 ZNF818PQ6ZRF7 136 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 SPACA3Q8IXA5 215 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 PRR18Q8N4B5 295 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 UBALD1Q8TB05 177 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 KIRREL1Q96J84 757 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 CNTNAP3Q9BZ76 1288 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 CXXC4Q9H2H0 198 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 PLCE1Q9P212 2302 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 C3orf85A0A1B0GTC6 90 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 C1orf196B1AJZ1 125 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 LINC00587B1AMM8 73 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 M0R1B8 84 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 ABCD4O14678 606 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 SH2D1BO14796 132 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 WNT9BO14905 357 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 FOSL1P15407 271 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 KITLGP21583 273 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 FAM209BQ5JX69 171 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 TBC1D26Q86UD7 250 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 FAM57AQ8TBR7 257 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 CCL28Q9NRJ3 127 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 UBE2J1Q9Y385 318 aaPredicted RBP8.85□□□□□ -0.99
USP43-205ENST00000574408 DNASE2O00115 360 aaPredicted RBP8.85□□□□□ -0.99
USP43-205ENST00000574408 TIMP3P35625 211 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 FLI1Q01543 452 aaPredicted RBP8.85□□□□□ -0.99
USP43-205ENST00000574408 ZNF880Q6PDB4 577 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 FIP1L1Q6UN15 594 aaKnown RBP8.85□□□□□ -0.99
USP43-205ENST00000574408 PCSK4Q6UW60 755 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 LDLRAD3Q86YD5 345 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 FAM185AQ8N0U4 392 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 LRTM2Q8N967 370 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 OR4A4PQ8NGN8 299 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 OR10J5Q8NHC4 309 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 C18orf12Q96KH6 178 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 REG4Q9BYZ8 158 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 TUBD1Q9UJT1 453 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 TRAPPC2LQ9UL33 140 aa8.85□□□□□ -0.99
USP43-205ENST00000574408 HAND1O96004 215 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 ARG1P05089 322 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 TUBG1P23258 451 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 MDH2P40926 338 aaKnown RBP8.84□□□□□ -0.99
USP43-205ENST00000574408 RAB13P51153 203 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 TLE1Q04724 770 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 ZNF146Q15072 292 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 USF2Q15853 346 aaPredicted RBP8.84□□□□□ -0.99
USP43-205ENST00000574408 TIMM23BQ5SRD1 257 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 TMEM268Q5VZI3 342 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 CISD2Q8N5K1 135 aaKnown RBP8.84□□□□□ -0.99
USP43-205ENST00000574408 AQP10Q96PS8 301 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 TUBG2Q9NRH3 451 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 DUSP13Q9UII6 198 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 TLN1Q9Y490 2541 aaKnown RBP8.84□□□□□ -0.99
USP43-205ENST00000574408 DMXL2Q8TDJ6 3036 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 H7C1Q1 480 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 BMP5P22003 454 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 RAB5BP61020 215 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 HFEQ30201 348 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 NCMAPQ5T1S8 102 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 C11orf53Q8IXP5 236 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 SLC35G3Q8N808 338 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 ARL11Q969Q4 196 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 MUCL1Q96DR8 90 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 AKR1E2Q96JD6 320 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 SLC25A32Q9H2D1 315 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 DNAJB11Q9UBS4 358 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 DCHS1Q96JQ0 3298 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 TPT1P13693 172 aaKnown RBP8.84□□□□□ -0.99
USP43-205ENST00000574408 AVPI1Q5T686 147 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 MBNL2Q5VZF2 373 aaKnown RBP8.84□□□□□ -0.99
USP43-205ENST00000574408 ZNF497Q6ZNH5 498 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 MOB1BQ7L9L4 216 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 FAM169BQ8N8A8 192 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 PHYHIPLQ96FC7 376 aa8.84□□□□□ -0.99
USP43-205ENST00000574408 PFDN5Q99471 154 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms