RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ZNF546Q86UE3 836 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 PPP1R35Q8TAP8 253 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 CA5BP1Q8WTZ4 195 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 PLPPR2Q96GM1 343 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 OR10C1Q96KK4 312 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 LURAP1Q96LR2 239 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 WNT2P09544 360 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 S100A11P31949 105 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 C6orf183Q5T699 404 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 TEX261Q6UWH6 196 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 OR1A1Q9P1Q5 309 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 TNFSF18Q9UNG2 199 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 U3KQ87 197 aa23.79■■□□□ 1.4
CTDNEP1-210ENST00000574322 UBR5O95071 2799 aaPredicted RBP23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 DIDO1Q9BTC0 2240 aaKnown RBP23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 MPTX1A8MV57 137 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 TSC22D2O75157 780 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 HOXB5P09067 269 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 TNFRSF1AP19438 455 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 SRPXP78539 464 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 TESK1Q15569 626 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 KRBOX4Q5JUW0 171 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 TMUB2Q71RG4 321 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 LGI3Q8N145 548 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 BVESQ8NE79 360 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 ANGPTL6Q8NI99 470 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 IL1F10Q8WWZ1 152 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 C18orf12Q96KH6 178 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 MFFQ9GZY8 342 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 CCL28Q9NRJ3 127 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 RDH8Q9NYR8 311 aa23.78■■□□□ 1.4
CTDNEP1-210ENST00000574322 C3orf85A0A1B0GTC6 90 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 NKX2-6A6NCS4 301 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 C12orf77C9JDV5 145 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 ATP6V1G1O75348 118 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 TFF1P04155 84 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 ZNF345Q14585 488 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 SP6Q3SY56 376 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 FAM209AQ5JX71 171 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 TRAT1Q6PIZ9 186 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 CMTM1Q8IZ96 169 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 ZNF808Q8N4W9 903 aaPredicted RBP23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 OR10V1Q8NGI7 309 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 THAP6Q8TBB0 222 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 ITLN2Q8WWU7 325 aaPredicted RBP23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 NCOR1P1Q9H4R4 102 aa23.77■■□□□ 1.4
CTDNEP1-210ENST00000574322 E7EQL1 145 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 MGST3O14880 152 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 IFNA21P01568 189 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 CD3EP07766 207 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 AGAP20933 346 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 TBC1D26Q86UD7 250 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 GALMQ96C23 342 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 TMEM222Q9H0R3 208 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 LYL1P12980 280 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 GABRA2P47869 451 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 CR1LQ2VPA4 569 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 LRRC37A5PQ49AS3 106 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 BOLLQ8N9W6 283 aaKnown RBP23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 TP53RKQ96S44 253 aa23.76■■□□□ 1.39
CTDNEP1-210ENST00000574322 A0A0D9SG52 128 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 K7N7A8 449 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 GLIPR1P48060 266 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 LUMP51884 338 aaPredicted RBP23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 CDSNQ15517 529 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 EFNB3Q15768 340 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 GGNBP1Q5YKI7 109 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 OR8H1Q8NGG4 311 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 SDSLQ96GA7 329 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 AKR1E2Q96JD6 320 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 TMEM56Q96MV1 263 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 KCNJ16Q9NPI9 418 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 PPP1R3CQ9UQK1 317 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 TMEM56-RWDD3S4R434 201 aa23.75■■□□□ 1.39
CTDNEP1-210ENST00000574322 PHF1O43189 567 aaPredicted RBP23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 B3GALNT1O75752 331 aa23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 OR2F2O95006 317 aa23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 SRSF1Q07955 248 aaKnown RBP eCLIP23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 OR2F1Q13607 317 aa23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 TEX36Q5VZQ5 186 aa23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 ZNF680Q8NEM1 530 aa23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 LINC01560Q8TB33 94 aa23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 RNF126Q9BV68 326 aa23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 ICE1Q9Y2F5 2266 aa23.74■■□□□ 1.39
CTDNEP1-210ENST00000574322 IGHV3OR15-7A0A075B7D8 119 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 HSPA12AO43301 675 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 PGLYRP1O75594 196 aaPredicted RBP23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 S100GP29377 79 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 APOBEC3AP31941 199 aaPredicted RBP23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 BEX5Q5H9J7 111 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 STUMQ69YW2 141 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 PRR18Q8N4B5 295 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 ZNF561Q8N587 486 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 MBD2Q9UBB5 411 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 FBXO9Q9UK97 447 aaPredicted RBP23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 FLNCQ14315 2725 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 HSD17B6O14756 317 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 HBZP02008 142 aa23.73■■□□□ 1.39
CTDNEP1-210ENST00000574322 MUC1P15941 1255 aaPredicted RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms