RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 DDTP30046 118 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 INPP1P49441 399 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 SPCS3P61009 180 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 DR1Q01658 176 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 EMX1Q04741 257 aaPredicted RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 GTF3C1Q12789 2109 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 BTN1A1Q13410 526 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 IHHQ14623 411 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 MAPK14Q16539 360 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 GUK1Q16774 197 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 RNF212Q495C1 297 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 TRMT12Q53H54 448 aaKnown RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 MESTQ5EB52 335 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 HIST2H3PS2Q5TEC6 136 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 TMEM215Q68D42 235 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 LCN8Q6JVE9 175 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 NANOGP8Q6NSW7 305 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 TCF23Q7RTU1 214 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 DPPA2Q7Z7J5 298 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 CLDN22Q8N7P3 220 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 CYB561D1Q8N8Q1 229 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 OR9I1Q8NGQ6 314 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 OR2K2Q8NGT1 345 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 SPPL2BQ8TCT7 592 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 C2orf15Q8WU43 125 aaKnown RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 APOBEC3DQ96AK3 386 aaPredicted RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 GALMQ96C23 342 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 CEP19Q96LK0 163 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 OR7D2Q96RA2 312 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 SDHCQ99643 169 aaPredicted RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 EBNA1BP2Q99848 306 aaKnown RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 RTBDNQ9BSG5 229 aaPredicted RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 ZNF717Q9BY31 904 aaPredicted RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 KRTAP1-5Q9BYS1 174 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 EIF5A2Q9GZV4 153 aaKnown RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 TLNRD1Q9H1K6 362 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 ZNF331Q9NQX6 463 aaPredicted RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 TMEM38BQ9NVV0 291 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 GLTPQ9NZD2 209 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 VPS29Q9UBQ0 182 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 RWDD2AQ9UIY3 292 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 LINC00527Q9UJ94 153 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 ZNF223Q9UK11 482 aaPredicted RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 YTHDF2Q9Y5A9 579 aaKnown RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 PCF11O94913 1555 aaKnown RBP1.38□□□□□ -2.19
CHD3-217ENST00000574022 ZBED9Q6R2W3 1325 aa1.38□□□□□ -2.19
CHD3-217ENST00000574022 CDC42BPBQ9Y5S2 1711 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 KMT2EQ8IZD2 1858 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 DYSFO75923 2080 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 IGLV4-69A0A075B6H9 119 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 IGHV1-45A0A0A0MS14 117 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 TRAV8-1A0A0A6YYK1 113 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 SMIM9A6NGZ8 99 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 F5H5P2 479 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ISLRO14498 428 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 CHP2O43745 196 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 POP7O75817 140 aaKnown RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 CNIH1O95406 144 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 CCNE2O96020 404 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 FBP1P09467 338 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ZNF708P17019 499 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ORM2P19652 201 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 G0S2P27469 103 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 MAGEA12P43365 314 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 REG1BP48304 166 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 PSMB3P49720 205 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 GNG10P50151 68 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 CDK9P50750 372 aaKnown RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 GABARAPL2P60520 117 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 SNAP25P60880 206 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 RAB5BP61020 215 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ELF3P78545 371 aaPredicted RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 HLA-DRB3P79483 266 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 FABP5Q01469 135 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 IFITM2Q01629 132 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 TMEM267Q0VDI3 215 aaPredicted RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 TAF1AQ15573 450 aaPredicted RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 SNCBQ16143 134 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 BATFQ16520 125 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 SP6Q3SY56 376 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ABCA11PQ4W5N1 156 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ZNF678Q5SXM1 525 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 MRPL2Q5T653 305 aaKnown RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 SPINK14Q6IE38 97 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 SFXN4Q6P4A7 337 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 Q6ZRU5 148 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ATP5L2Q7Z4Y8 100 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 S100A7AQ86SG5 101 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 DOLPP1Q86YN1 238 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 OR6V1Q8N148 313 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 LRRC25Q8N386 305 aaPredicted RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 UBL4BQ8N7F7 174 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 ZNF433Q8N7K0 673 aaPredicted RBP1.37□□□□□ -2.19
CHD3-217ENST00000574022 PXT1Q8NFP0 134 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 OR51D1Q8NGF3 324 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 OR52N1Q8NH53 320 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 OR51H1Q8NH63 302 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 OR2V1Q8NHB1 315 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 JOSD2Q8TAC2 188 aa1.37□□□□□ -2.19
CHD3-217ENST00000574022 Q8WTZ3 238 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms