RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 MAS1P04201 325 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 CDK1P06493 297 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 VSIG10L2P0DP72 767 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 GTF2F2P13984 249 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 GZMHP20718 246 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 GLP1RP43220 463 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 ARHGDIBP52566 201 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 RBM11P57052 281 aaKnown RBP5.96□□□□□ -1.46
NUP88-205ENST00000572809 BLCAPP62952 87 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 PAX5Q02548 391 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 HLA-DRB5Q30154 266 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 SLC22A6Q4U2R8 563 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 NHLRC3Q5JS37 347 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 C6orf141Q5SZD1 244 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 ATAD3CQ5T2N8 411 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 RSBN1Q5VWQ0 802 aaPredicted RBP5.96□□□□□ -1.46
NUP88-205ENST00000572809 RNLSQ5VYX0 342 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 GLIPR1L1Q6UWM5 242 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 LINC00596Q86U02 117 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 Q8N2B8 174 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 JAGN1Q8N5M9 183 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 KLHDC1Q8N7A1 406 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 C11orf44Q8N8P7 122 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 OR10A7Q8NGE5 316 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 OR9G1Q8NH87 305 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 RFESDQ8TAC1 157 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 MRGPRDQ8TDS7 321 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 MYDGFQ969H8 173 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 MRPS24Q96EL2 167 aaKnown RBP5.96□□□□□ -1.46
NUP88-205ENST00000572809 OR14A2Q96R54 314 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 LINC00574Q9H8X3 128 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 ZNF702PQ9H963 129 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 TMEM140Q9NV12 185 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 SCN3BQ9NY72 215 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 CALYQ9NYX4 217 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 IDI2-AS1Q9NZ38 188 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 ZNF581Q9P0T4 197 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 MRPS28Q9Y2Q9 187 aaKnown RBP5.96□□□□□ -1.46
NUP88-205ENST00000572809 PKD1L1Q8TDX9 2849 aa5.96□□□□□ -1.46
NUP88-205ENST00000572809 TRAV39A0A0B4J263 110 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 A0A1W2PP11 408 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 MAGEA13PA6NCF6 341 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 OOSP1A8MZH6 123 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 MCRIP1C9JLW8 97 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 NPIPB11E5RHQ5 1161 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 J3QR06 171 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 PIN1P1O15428 100 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 IGHV3-7P01780 117 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 CSF1P09603 554 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 GYPEP15421 78 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 CD24P25063 80 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 MNDAP41218 407 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 RBM39Q14498 530 aaKnown RBP5.95□□□□□ -1.46
NUP88-205ENST00000572809 HABP2Q14520 560 aaPredicted RBP5.95□□□□□ -1.46
NUP88-205ENST00000572809 LTC4SQ16873 150 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 C2orf68Q2NKX9 166 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 MPV17LQ2QL34 196 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 ACSM3Q53FZ2 586 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 UTF1Q5T230 341 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 TPTE2P1Q5T6R2 138 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 UNQ9370/PRO34162Q6UXP9 181 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 SLC16A12Q6ZSM3 486 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 C16orf82Q7Z2V1 217 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 MS4A15Q8N5U1 240 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 FAM110DQ8TAY7 271 aaPredicted RBP5.95□□□□□ -1.46
NUP88-205ENST00000572809 NEK7Q8TDX7 302 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 CFHR4Q92496 578 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 THRSPQ92748 146 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 MUL1Q969V5 352 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 AKR1E2Q96JD6 320 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 DERL3Q96Q80 235 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 MND1Q9BWT6 205 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 MMP28Q9H239 520 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 TMPRSS5Q9H3S3 457 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 SERTAD4Q9NUC0 356 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 PSG11Q9UQ72 335 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 TPRKBQ9Y3C4 175 aa5.95□□□□□ -1.46
NUP88-205ENST00000572809 TMEM30CPA0ZSE6 113 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 C9orf118A6NHY6 69 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 H0YHG0 523 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 ORC5O43913 435 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 IL1AP01583 271 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 MT-ND4P03905 459 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 FAM106CPP0CH98 169 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 MAPK3P27361 379 aaPredicted RBP5.94□□□□□ -1.46
NUP88-205ENST00000572809 AQP4P55087 323 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 DEFA6Q01524 100 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 EMX1Q04741 257 aaPredicted RBP5.94□□□□□ -1.46
NUP88-205ENST00000572809 GABPB1Q06547 395 aaPredicted RBP5.94□□□□□ -1.46
NUP88-205ENST00000572809 GPR50Q13585 617 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 SPHARQ15513 63 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 MED22Q15528 200 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 HIST2H2BDQ6DRA6 164 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 AWAT2Q6E213 333 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 CCDC144NLQ6NUI1 221 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 LYPD6Q86Y78 171 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 CCDC107Q8WV48 283 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 CAPSLQ8WWF8 208 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 LEAP2Q969E1 77 aa5.94□□□□□ -1.46
NUP88-205ENST00000572809 ARL11Q969Q4 196 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms