RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 HERPUD1Q15011 391 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 KRTAP19-4Q3LI73 84 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 OR2B11Q5JQS5 317 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 TMEM236Q5W0B7 351 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 LCN8Q6JVE9 175 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF613Q6PF04 617 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 FGD6Q6ZV73 1430 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 C1QL2Q7Z5L3 287 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 TRPT1Q86TN4 253 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 NFE4Q86UQ8 179 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 ZCCHC24Q8N2G6 241 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 CIARTQ8N365 385 aaPredicted RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF615Q8N8J6 731 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC30A7Q8NEW0 376 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 GPR119Q8TDV5 335 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 NPRL2Q8WTW4 380 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 THEM6Q8WUY1 208 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 RPUSD4Q96CM3 377 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 NARS2Q96I59 477 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 PPP3R2Q96LZ3 170 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 LYSMD1Q96S90 227 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 ZNF382Q96SR6 550 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 GABARAPL3Q9BY60 117 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 EIF5A2Q9GZV4 153 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 PBOV1Q9GZY1 135 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 SLCO1B3Q9NPD5 702 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 ADARB2Q9NS39 739 aaKnown RBP3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 TMEM216Q9P0N5 145 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 SLC25A15Q9Y619 301 aa3.91□□□□□ -1.78
TOPBP1-210ENST00000572787 MED23Q9ULK4 1368 aa3.9□□□□□ -1.78
TOPBP1-210ENST00000572787 TRAV8-3A0A0A6YYJ7 113 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 C16orf97H3BN30 126 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 TP53I11O14683 189 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 GGCTO75223 188 aaKnown RBP3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 DHRS3O75911 302 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 KBTBD11O94819 623 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 KCNK2O95069 426 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 CDS2O95674 445 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 CECR9P0C854 216 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 CTLA4P16410 223 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 GADD45AP24522 165 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 CD70P32970 193 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 BTCP35070 178 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 TNFAIP6P98066 277 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 BIKQ13323 160 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 PNOCQ13519 176 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 JOSD1Q15040 202 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 TAF9Q16594 264 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 MORN2Q502X0 79 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 KDM4DQ6B0I6 523 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 LCN12Q6JVE5 192 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 H2AFVQ71UI9 128 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 VN1R4Q7Z5H5 301 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 SLC25A45Q8N413 288 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 STPG4Q8N801 248 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 SYT8Q8NBV8 401 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 OR2G3Q8NGZ4 309 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 OR2T4Q8NH00 348 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 OR1L1Q8NH94 360 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 NTN5Q8WTR8 489 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 FAM151AQ8WW52 585 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF689Q96CS4 500 aaPredicted RBP3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 GPR82Q96P67 336 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM222Q9H0R3 208 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 DEFB127Q9H1M4 99 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 TMPRSS5Q9H3S3 457 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 EDA2RQ9HAV5 297 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 FAIMQ9NVQ4 179 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 DPM3Q9P2X0 92 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 MYRFQ9Y2G1 1151 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 U3KQ87 197 aa3.9□□□□□ -1.79
TOPBP1-210ENST00000572787 ERBINQ96RT1 1412 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 MEIKINA0A087WXM9 373 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 IGHV7-81A0A0B4J1V7 117 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 IGHV1-69DA0A0B4J2H0 117 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 DNAJC9-AS1A6NH13 148 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 NTN3O00634 580 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 ANGPTL7O43827 346 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 LAMP1P11279 417 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 CPMP14384 443 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 BLVRBP30043 206 aaPredicted RBP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 HSPA9P38646 679 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 NCBP2P52298 156 aaKnown RBP eCLIP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 GFERP55789 205 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 NDUFV3P56181 108 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 CTBP2P56545 445 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 RAP1AP62834 184 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 SELENOWP63302 87 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 LY6DQ14210 128 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 ZNF146Q15072 292 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 RGNQ15493 299 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 FBXL19-AS1Q494R0 122 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 MESTQ5EB52 335 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 IBA57Q5T440 356 aaKnown RBP3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 FAM222AQ5U5X8 452 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 NUP37Q8NFH4 326 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 TMEM159Q96B96 161 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 STARD4Q96DR4 205 aa3.89□□□□□ -1.79
TOPBP1-210ENST00000572787 SLC25A44Q96H78 314 aaPredicted RBP3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms